RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RBM39Q14498 530 aaKnown RBP10.72□□□□□ -0.69
SRRM1-223ENST00000600523 FAM189A2Q15884 450 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 RAB11BQ15907 218 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 PIGYQ3MUY2 71 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 KRBOX4Q5JUW0 171 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 ATAD3CQ5T2N8 411 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 TMEM200BQ69YZ2 307 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 CD200R1LQ6Q8B3 271 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 C17orf107Q6ZR85 190 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 LRRTM1Q86UE6 522 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 ZNF565Q8N9K5 539 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 OR4S1Q8NGB4 309 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 OR4D6Q8NGJ1 314 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 KCNG3Q8TAE7 436 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 LHX4Q969G2 390 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 ZNF714Q96N38 554 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 NKX3-1Q99801 234 aaPredicted RBP10.72□□□□□ -0.69
SRRM1-223ENST00000600523 SELENOIQ9C0D9 397 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 GAL3ST2Q9H3Q3 398 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 ZNF696Q9H7X3 374 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 HEXA-AS1Q9H8Q6 139 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 OR6C3Q9NZP0 311 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 AK6Q9Y3D8 172 aaKnown RBP10.72□□□□□ -0.69
SRRM1-223ENST00000600523 LINC00312Q9Y6C7 94 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 V9GY05 133 aa10.72□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A10PA6NDY2 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A18PA6NE21 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A16PA6NEW6 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A20PA6NIJ5 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A8PA6NJQ4 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A7PA6NKC0 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A22PA8MWA6 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A12PA8MX19 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A5PA8MXJ8 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A23PA8MXZ1 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 MCRIP1C9JLW8 97 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 SLC33A1O00400 549 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 HSPB6O14558 160 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 GEMIN2O14893 280 aaKnown RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 PSPNO60542 156 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FCN3O75636 299 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 BPNT1O95861 308 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 RBP4P02753 201 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A15PP0C7V4 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A13PP0C7W8 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A14PP0C7W9 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM90A24PP0C7X0 464 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 MMP9P14780 707 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 ARSBP15848 533 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 MGMTP16455 207 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 CD36P16671 472 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 PRTN3P24158 256 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FGF9P31371 208 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 OR3A1P47881 315 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 C1orf100Q5SVJ3 147 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 Q6P435 159 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 METAP1DQ6UB28 335 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 KCTD7Q96MP8 289 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 URM1Q9BTM9 101 aaKnown RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 DPCDQ9BVM2 203 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 PPIL3Q9H2H8 161 aaKnown RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 IFT22Q9H7X7 185 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 UBE2J1Q9Y385 318 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-223ENST00000600523 FAM96BQ9Y3D0 163 aa10.71□□□□□ -0.69
SRRM1-223ENST00000600523 IGHV3OR16-10A0A075B7F0 116 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 SLC17A2O00624 439 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 SLC22A1O15245 554 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 MPIG6BO95866 241 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 FSHBP01225 129 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 IGHV1-69P01742 117 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 RAB3BP20337 219 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 AESQ08117 197 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 ATXN7L3Q14CW9 347 aaPredicted RBP10.7□□□□□ -0.7
SRRM1-223ENST00000600523 TAF9Q16594 264 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 OR13D1Q8NGV5 346 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 FAM46BQ96A09 425 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 TMEM59Q9BXS4 323 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 UNKLQ9H9P5 680 aaKnown RBP10.7□□□□□ -0.7
SRRM1-223ENST00000600523 RAB9BQ9NP90 201 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 SIRT7Q9NRC8 400 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 ING3Q9NXR8 418 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 ARHGAP32A7KAX9 2087 aa10.7□□□□□ -0.7
SRRM1-223ENST00000600523 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
SRRM1-223ENST00000600523 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 MEIKINA0A087WXM9 373 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 LOC100506127A0A0U1RQW1 187 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 CENPVL3A0A0U1RRI6 287 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 ODAMA1E959 279 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 PAHP00439 452 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 GP2P55259 537 aaKnown RBP10.69□□□□□ -0.7
SRRM1-223ENST00000600523 LGALS4P56470 323 aa10.69□□□□□ -0.7
SRRM1-223ENST00000600523 KLF17Q5JT82 389 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms