RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SERPINA12Q8IW75 414 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 SYS1Q8N2H4 156 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CBR4Q8N4T8 237 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 OR5D14Q8NGL3 314 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CREB3L1Q96BA8 519 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 LGALS12Q96DT0 336 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 Q96MT0 163 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CITED2Q99967 270 aaPredicted RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 MMP28Q9H239 520 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 INPP5EQ9NRR6 644 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 DPM3Q9P2X0 92 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 DHDHQ9UQ10 334 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 ZNF729A6NN14 1252 aaPredicted RBP7.86□□□□□ -1.15
VRK3-216ENST00000599342 FAM90A22PA8MWA6 464 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 H3BNX3 289 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 DEGS1O15121 323 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 MAGEB3O15480 346 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 MNDAP41218 407 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 GBX2P52951 348 aaPredicted RBP7.86□□□□□ -1.15
VRK3-216ENST00000599342 PRRX1P54821 245 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 BDH1Q02338 343 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 RBM39Q14498 530 aaKnown RBP7.86□□□□□ -1.15
VRK3-216ENST00000599342 KISS1Q15726 138 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 TMEM95Q3KNT9 176 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 KPRPQ5T749 579 aaPredicted RBP7.86□□□□□ -1.15
VRK3-216ENST00000599342 BAIAP2L2Q6UXY1 529 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 Q6ZS46 218 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 CCDC121Q6ZUS5 278 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 C10orf67Q8IYJ2 551 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 OR5AK2Q8NH90 309 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 CORO2AQ92828 525 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 GPER1Q99527 375 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 SLC25A33Q9BSK2 321 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 C9orf16Q9BUW7 83 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 WNT10AQ9GZT5 417 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 LIN7BQ9HAP6 207 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 OR6C3Q9NZP0 311 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 AASSQ9UDR5 926 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 MYRFQ9Y2G1 1151 aa7.86□□□□□ -1.15
VRK3-216ENST00000599342 DSCAML1Q8TD84 2053 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 H0YJX3 145 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 SLC33A1O00400 549 aaPredicted RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 HSPB6O14558 160 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 OR2F2O95006 317 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ALX3O95076 343 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ZFPL1O95159 310 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 IGLV1-47P01700 117 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 PF4V1P10720 104 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 CD33P20138 364 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 RAB3AP20336 220 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 CD24P25063 80 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 NFYBP25208 207 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 CD34P28906 385 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 GLP1RP43220 463 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 OR3A4PP47883 348 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 MTNR1BP49286 362 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ZP1P60852 638 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 RAB40BQ12829 278 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 HLA-DRB5Q30154 266 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ABCA11PQ4W5N1 156 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 PAN3Q58A45 887 aaKnown RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 ZNF691Q5VV52 312 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 LPCAT4Q643R3 524 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 CCDC144NLQ6NUI1 221 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 Q6P435 159 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 CENPVQ7Z7K6 275 aaPredicted RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 PARP16Q8N5Y8 322 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ZNF565Q8N9K5 539 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 OR5AU1Q8NGC0 362 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 OR4X2Q8NGF9 303 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 HAVCR2Q8TDQ0 301 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 WIPF2Q8TF74 440 aaPredicted RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 SGCDQ92629 289 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 COQ2Q96H96 371 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 NR1H4Q96RI1 486 aaPredicted RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 PDCD1LG2Q9BQ51 273 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 FAM192AQ9GZU8 254 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ISG20L2Q9H9L3 353 aaKnown RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 ZNF286AQ9HBT8 521 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 AMBNQ9NP70 447 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
VRK3-216ENST00000599342 RPL36Q9Y3U8 105 aaKnown RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 AMMECR1Q9Y4X0 333 aaPredicted RBP7.85□□□□□ -1.15
VRK3-216ENST00000599342 MEIKINA0A087WXM9 373 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 A0A087X0M5 115 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 LOC100130705A0A1B0GUX0 176 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 A0A1B0GX30 115 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 OOSP1A8MZH6 123 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 E9PQ18 207 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 M0QZK8 103 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 PIN1P1O15428 100 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 PF4P02776 101 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 PRB2P02812 416 aaPredicted RBP7.84□□□□□ -1.15
VRK3-216ENST00000599342 CD2P06729 351 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 LPLP06858 475 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 GABRB1P18505 474 aa7.84□□□□□ -1.15
VRK3-216ENST00000599342 C21orf33P30042 268 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms