RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 ZNF44P15621 663 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 NANOS3P60323 173 aaKnown RBP12.66□□□□□ -0.38
LINC02560-201ENST00000596379 KRBOX4Q5JUW0 171 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 UTF1Q5T230 341 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 C11orf87Q6NUJ2 197 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 Q6P435 159 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 OR5D18Q8NGL1 313 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 RFKQ969G6 155 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 COQ2Q96H96 371 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 MBOAT4Q96T53 435 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 AP4S1Q9Y587 144 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
LINC02560-201ENST00000596379 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
LINC02560-201ENST00000596379 MNDAP41218 407 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 PTGFRP43088 359 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 OR3A4PP47883 348 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
LINC02560-201ENST00000596379 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 OSR2Q8N2R0 312 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 OR10AC1Q8NH08 325 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC02560-201ENST00000596379 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
LINC02560-201ENST00000596379 A0A087X0M5 115 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 A0A1B0GX30 115 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 OOSP1A8MZH6 123 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 M0QZK8 103 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
LINC02560-201ENST00000596379 DEGS1O15121 323 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 FAM106CPP0CH98 169 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 NFYBP25208 207 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
LINC02560-201ENST00000596379 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 OR51A4Q8NGJ6 313 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 HRASLS5Q96KN8 279 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 GABARAPL3Q9BY60 117 aa12.64□□□□□ -0.39
LINC02560-201ENST00000596379 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
LINC02560-201ENST00000596379 DAPL1A0PJW8 107 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A20PA6NIJ5 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A9PA6NNJ1 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A12PA8MX19 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A5PA8MXJ8 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 MT-ND2P03891 347 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 CSN2P05814 226 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 HTR1AP08908 422 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A15PP0C7V4 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A13PP0C7W8 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A14PP0C7W9 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 FAM90A24PP0C7X0 464 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 ZNF329Q86UD4 541 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 THNSL2Q86YJ6 484 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 MRPL41Q8IXM3 137 aaKnown RBP12.63□□□□□ -0.39
LINC02560-201ENST00000596379 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 OR13C3Q8NGS6 347 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 ZNF649Q9BS31 505 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 MOB4Q9Y3A3 225 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 HSPE1-MOB4S4R3N1 261 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
LINC02560-201ENST00000596379 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 J3QRE1 110 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 SLC16A6O15403 523 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 IGHV3-7P01780 117 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 SNRNP70P08621 437 aaKnown RBP12.62□□□□□ -0.39
LINC02560-201ENST00000596379 CGB3P0DN86 165 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 CGB7P0DN87 165 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 CCR9P51686 369 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 BNIP1Q12981 228 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 RPEQ96AT9 228 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 RNFT2Q96EX2 444 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 KIRREL1Q96J84 757 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 OSBPL10Q9BXB5 764 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 ZCCHC4Q9H5U6 513 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 OAZ3Q9UMX2 235 aa12.62□□□□□ -0.39
LINC02560-201ENST00000596379 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 J3QLW9 94 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 J3QR06 171 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 VSIG8P0DPA2 414 aa12.61□□□□□ -0.39
LINC02560-201ENST00000596379 FCGR1AP12314 374 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms