RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 FCGR1BQ92637 280 aa14.96□□□□□ -0.01
ZNF558-204ENST00000596172 MRPS24Q96EL2 167 aaKnown RBP14.96□□□□□ -0.01
ZNF558-204ENST00000596172 MDFIQ99750 246 aa14.96□□□□□ -0.01
ZNF558-204ENST00000596172 NKX3-1Q99801 234 aaPredicted RBP14.96□□□□□ -0.01
ZNF558-204ENST00000596172 CHST6Q9GZX3 395 aa14.96□□□□□ -0.01
ZNF558-204ENST00000596172 IFT22Q9H7X7 185 aa14.96□□□□□ -0.01
ZNF558-204ENST00000596172 SIRT7Q9NRC8 400 aa14.96□□□□□ -0.01
ZNF558-204ENST00000596172 C17orf98A8MV24 154 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 RNASEK-C17orf49H0YIS7 233 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 ARL6IP5O75915 188 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 RGS9O75916 674 aaPredicted RBP14.95□□□□□ -0.02
ZNF558-204ENST00000596172 GTF2F2P13984 249 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 UBE2E1P51965 193 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 P2RX3P56373 397 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 SCN1BQ07699 218 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 ZNF273Q14593 569 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 KCTD21Q4G0X4 260 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 ZNF773Q6PK81 442 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 SIGLECL1Q8N7X8 197 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 MUL1Q969V5 352 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 ZNF48Q96MX3 618 aaPredicted RBP14.95□□□□□ -0.02
ZNF558-204ENST00000596172 NR1H4Q96RI1 486 aaPredicted RBP14.95□□□□□ -0.02
ZNF558-204ENST00000596172 SLITRK2Q9H156 845 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 GHRLQ9UBU3 117 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 ST3GAL6Q9Y274 331 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 MRPS28Q9Y2Q9 187 aaKnown RBP14.95□□□□□ -0.02
ZNF558-204ENST00000596172 LINC00312Q9Y6C7 94 aa14.95□□□□□ -0.02
ZNF558-204ENST00000596172 TRAV24A0A0B4J272 114 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 ZNF728P0DKX0 622 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 RBM11P57052 281 aaKnown RBP14.94□□□□□ -0.02
ZNF558-204ENST00000596172 PAX5Q02548 391 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 EDDM3AQ14507 147 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 SSX1Q16384 188 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 PIGYQ3MUY2 71 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 SLC22A6Q4U2R8 563 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 C1orf100Q5SVJ3 147 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 GLT8D1Q68CQ7 371 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 GLIPR1L1Q6UWM5 242 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 ZDHHC22Q8N966 263 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 OR4D6Q8NGJ1 314 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 CORO2AQ92828 525 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 C1orf147Q96MC9 270 aaPredicted RBP14.94□□□□□ -0.02
ZNF558-204ENST00000596172 NCOR1P1Q9H4R4 102 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 HEXA-AS1Q9H8Q6 139 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 NDUFB11Q9NX14 153 aa14.94□□□□□ -0.02
ZNF558-204ENST00000596172 SOX21Q9Y651 276 aaPredicted RBP14.94□□□□□ -0.02
ZNF558-204ENST00000596172 RNF212BA8MTL3 300 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 CCL3L1P16619 93 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 GALP22466 123 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 KCNJ3P48549 501 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 FABP5Q01469 135 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 MPV17LQ2QL34 196 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 DEFB112Q30KQ8 113 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 KRTAP24-1Q3LI83 254 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 RUSC1-AS1Q66K80 236 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 HCP5Q6MZN7 132 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 CD200R1LQ6Q8B3 271 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 TCF23Q7RTU1 214 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 ZNF714Q96N38 554 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 PPA2Q9H2U2 334 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 ZMAT3Q9HA38 289 aaKnown RBP14.93□□□□□ -0.02
ZNF558-204ENST00000596172 ESM1Q9NQ30 184 aa14.93□□□□□ -0.02
ZNF558-204ENST00000596172 UBE2J1Q9Y385 318 aaPredicted RBP14.93□□□□□ -0.02
ZNF558-204ENST00000596172 CLDN34H7C241 214 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 TRIM77I1YAP6 450 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 UBBP0CG47 229 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 SERPINA2P20848 420 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 ERVFRD-1P60508 538 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 SRSF2Q01130 221 aaKnown RBP14.92□□□□□ -0.02
ZNF558-204ENST00000596172 AWAT2Q6E213 333 aa14.92□□□□□ -0.02
ZNF558-204ENST00000596172 TRDV1A0A1B0GX56 115 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A10PA6NDY2 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A18PA6NE21 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A16PA6NEW6 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A20PA6NIJ5 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A8PA6NJQ4 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A7PA6NKC0 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A22PA8MWA6 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A12PA8MX19 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A5PA8MXJ8 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A23PA8MXZ1 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 CCRL2O00421 344 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 GEMIN2O14893 280 aaKnown RBP14.91□□□□□ -0.02
ZNF558-204ENST00000596172 NPFFO15130 113 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A15PP0C7V4 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A13PP0C7W8 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A14PP0C7W9 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM90A24PP0C7X0 464 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 GLIPR1P48060 266 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 DLX1P56177 255 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 AESQ08117 197 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 BAMBIQ13145 260 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 MIDNQ504T8 468 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 PAN3Q58A45 887 aaKnown RBP14.91□□□□□ -0.02
ZNF558-204ENST00000596172 KRBOX4Q5JUW0 171 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 Q6YL49 198 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 PDZD9Q8IXQ8 264 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 TPRX1Q8N7U7 411 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 FAM216AQ8WUB2 273 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms