RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 MRPS24Q96EL2 167 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 PRDM13Q9H4Q3 707 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 ACOT13Q9NPJ3 140 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 ST3GAL6Q9Y274 331 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
SHKBP1-212ENST00000596163 C17orf98A8MV24 154 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 RNASEK-C17orf49H0YIS7 233 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SLC33A1O00400 549 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SC5DO75845 299 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 UCHL1P09936 223 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SERPINA2P20848 420 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 KCNJ3P48549 501 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SRSF2Q01130 221 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 ZNF273Q14593 569 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SLC22A6Q4U2R8 563 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 PHC2Q8IXK0 858 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 ZDHHC22Q8N966 263 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 FAM216AQ8WUB2 273 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 MUL1Q969V5 352 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 ZNF48Q96MX3 618 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 ZNF714Q96N38 554 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 C19orf24Q9BVV8 132 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 BARHL1Q9BZE3 327 aa14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 UBE2J1Q9Y385 318 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-212ENST00000596163 TRGV10A0A0A0MS01 117 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 MAGEA13PA6NCF6 341 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 H3BUI4 141 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 CLDN34H7C241 214 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 NPFFO15130 113 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 CCL3L1P16619 93 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 GABRA5P31644 462 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 RANBP1P43487 201 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 UBA52P62987 128 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 INSL4Q14641 139 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 PAN3Q58A45 887 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 TRAPPC6BQ86SZ2 158 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 SLC25A28Q96A46 364 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 NKX3-1Q99801 234 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 PPA2Q9H2U2 334 aa14.15□□□□□ -0.14
SHKBP1-212ENST00000596163 FBP1P09467 338 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 UBBP0CG47 229 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 RBM11P57052 281 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 RPS25P62851 125 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 AESQ08117 197 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 MPV17LQ2QL34 196 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 PIGYQ3MUY2 71 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 MIDNQ504T8 468 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 KRBOX4Q5JUW0 171 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 Q6YL49 198 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 SPARTQ8N0X7 666 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 TMEM86BQ8N661 226 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 OR13D1Q8NGV5 346 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 GAL3ST2Q9H3Q3 398 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 IFT22Q9H7X7 185 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 SPACA1Q9HBV2 294 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 ESM1Q9NQ30 184 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 TAS2R3Q9NYW6 316 aa14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-212ENST00000596163 MEIOCA2RUB1 952 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 DNAJC9-AS1A6NH13 148 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 OR7C1O76099 320 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 PAHP00439 452 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 DLX6P56179 175 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 LGALS4P56470 323 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 KLRD1Q13241 179 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM27D1Q5T7N8 215 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 UBE2UQ5VVX9 321 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 LRRTM1Q86UE6 522 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 LYPD6Q86Y78 171 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 C11orf42Q8N5U0 333 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 TPRX1Q8N7U7 411 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 ZNF565Q8N9K5 539 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 SSMEM1Q8WWF3 244 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 CORO2AQ92828 525 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 CST11Q9H112 138 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 OR6C3Q9NZP0 311 aa14.13□□□□□ -0.15
SHKBP1-212ENST00000596163 TRAV24A0A0B4J272 114 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 A0A0U1RQK1 487 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 A0A1W2PRD5 423 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 A0A1W2PRF3 423 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 A0A1W2PRM7 423 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 ODAMA1E959 279 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 GEMIN2O14893 280 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 HOXA3O43365 443 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 IGHV1-8P0DP01 117 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 GLIPR1P48060 266 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 PSMD7P51665 324 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 GP2P55259 537 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 ACTG1P63261 375 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms