RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PRDX2P32119 198 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 RCVRNP35243 200 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 ACTBP60709 375 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 ACTG1P63261 375 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 DYRK1AQ13627 763 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 ARFRP1Q13795 201 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 ANGPTL6Q8NI99 470 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 DYRK2Q92630 601 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 CMSS1Q9BQ75 279 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 DNAJB11Q9UBS4 358 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 METRNQ9UJH8 293 aa12.34□□□□□ -0.43
SHKBP1-211ENST00000595945 CRYBG3Q68DQ2 2970 aa12.33□□□□□ -0.43
SHKBP1-211ENST00000595945 POLQO75417 2590 aa12.33□□□□□ -0.43
SHKBP1-211ENST00000595945 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TMEM82A0PJX8 343 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 MCRIP1C9JLW8 97 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF737O75373 536 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 FSTL3O95633 263 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TFF1P04155 84 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 CSF1P09603 554 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 DTYMKP23919 212 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 COL8A2P25067 703 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF57Q68EA5 555 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 Q6ZPA2 131 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 C17orf107Q6ZR85 190 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 DCDC5Q6ZRR9 648 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 GAPTQ8N292 157 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 GVQW1Q8N7I0 195 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TMEM229BQ8NBD8 167 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 OR5T2Q8NGG2 359 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 DEDD2Q8WXF8 326 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 CCL17Q92583 94 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 RDH5Q92781 318 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 SDSLQ96GA7 329 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 PSMG3-AS1Q96PY0 264 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 CHST6Q9GZX3 395 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 C11orf54Q9H0W9 315 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 DLL4Q9NR61 685 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 TAS2R8Q9NYW2 309 aa12.33□□□□□ -0.44
SHKBP1-211ENST00000595945 PPIAL4EA0A075B759 164 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PPIAL4DF5H284 164 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PSPNO60542 156 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 CD74P04233 296 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 FCGR3AP08637 254 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 GSTT2BP0CG30 244 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PPIAL4FP0DN26 164 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 OR3A1P47881 315 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 KCNJ3P48549 501 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 INPP1P49441 399 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 DEFA1P59665 94 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 DEFA3P59666 94 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 AP3S2P59780 193 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PAX5Q02548 391 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 COL10A1Q03692 680 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 MICBQ29980 383 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 HFEQ30201 348 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 SFRP4Q6FHJ7 346 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF788Q6ZQV5 615 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 Q6ZS49 121 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 BPIFB2Q8N4F0 458 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PLPPR1Q8TBJ4 325 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 SNAPC3Q92966 411 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 C7orf50Q9BRJ6 194 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 PPIAL4AQ9Y536 164 aa12.32□□□□□ -0.44
SHKBP1-211ENST00000595945 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 LINC00854A0A1B0GVQ3 168 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 POM121CA8CG34 1229 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 LYRM1O43325 122 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF205O95201 554 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 COL8A1P27658 744 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 CDKN1AP38936 164 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 SRSF7Q16629 238 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 RGS21Q2M5E4 152 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF880Q6PDB4 577 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 POC5Q8NA72 575 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 DEFB108BQ8NET1 73 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 OR4S1Q8NGB4 309 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 MRPL30Q8TCC3 161 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 SNX22Q96L94 193 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 GAFA1Q96PS6 74 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 SHARPINQ9H0F6 387 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
SHKBP1-211ENST00000595945 HRASLSQ9HDD0 168 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms