RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 EGR1P18146 543 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 GDNFP39905 211 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CBX5P45973 191 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 RBM39Q14498 530 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 Q6P435 159 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CLEC9AQ6UXN8 241 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 TRAPPC6BQ86SZ2 158 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 OR5T2Q8NGG2 359 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 NEK7Q8TDX7 302 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 GPX8Q8TED1 209 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CCL17Q92583 94 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CMSS1Q9BQ75 279 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CLEC4MQ9H2X3 399 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 TAS2R8Q9NYW2 309 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 KLK11Q9UBX7 282 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 MTFP1Q9UDX5 166 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 PLEKHA6Q9Y2H5 1048 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 KCNK7Q9Y2U2 307 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 WIPI2Q9Y4P8 454 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 AKAP6Q13023 2319 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 MXRA5Q9NR99 2828 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 IGHV3OR15-7A0A075B7D8 119 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 MEIS3P1A6NDR6 274 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 RFPL4AA6NLU0 287 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 RFPL4AL1F8VTS6 287 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SIRPB1O00241 398 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 LANCL1O43813 399 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 OR2H2O95918 312 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 PRDX2P32119 198 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 CD80P33681 288 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 GABRA2P47869 451 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 AP3S2P59780 193 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 MICBQ29980 383 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 HFEQ30201 348 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 OLFML2AQ68BL7 652 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SFRP4Q6FHJ7 346 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 DNM1P46Q6ZS02 220 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 RTN4RL2Q86UN3 420 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 POC5Q8NA72 575 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SUMF2Q8NBJ7 301 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 DEFB108BQ8NET1 73 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 NUDCD2Q8WVJ2 157 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 ST8SIA4Q92187 359 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 RDH5Q92781 318 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 COX4I2Q96KJ9 171 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SULT4A1Q9BR01 284 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 IFT22Q9H7X7 185 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 IFT46Q9NQC8 304 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 TMEM106BQ9NUM4 274 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 ZNF581Q9P0T4 197 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 AK3Q9UIJ7 227 aa10.96□□□□□ -0.65
SHKBP1-209ENST00000595803 CHD3Q12873 2000 aaKnown RBP10.96□□□□□ -0.66
SHKBP1-209ENST00000595803 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PPIAL4EA0A075B759 164 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 OR2AT4A6NND4 320 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 CENPXA8MT69 81 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PPIAL4DF5H284 164 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 TMEM178BH3BS89 294 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 SSX5O60225 188 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 HEXAP06865 529 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 CSF1P09603 554 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PPIAL4FP0DN26 164 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PSG2P11465 335 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 COL8A2P25067 703 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 LMO1P25800 156 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 ACTBP60709 375 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 ACTG1P63261 375 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 HOXA4Q00056 320 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PAN3Q58A45 887 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 FAM201AQ5SY85 155 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 BPIFB2Q8N4F0 458 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PPP1R35Q8TAP8 253 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 SETD6Q8TBK2 473 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 C18orf12Q96KH6 178 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 ST6GALNAC5Q9BVH7 336 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 DPCDQ9BVM2 203 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 CHMP1AQ9HD42 196 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 RCC2Q9P258 522 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 RBMX2Q9Y388 322 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 CACNG2Q9Y698 323 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 DYSFO75923 2080 aa10.95□□□□□ -0.66
SHKBP1-209ENST00000595803 TRAV38-1A0A0B4J264 116 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 OOEPA6NGQ2 149 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 LGALS8O00214 317 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 SLC33A1O00400 549 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 HSPB6O14558 160 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms