RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 LINC00596Q86U02 117 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 CHCHD6Q9BRQ6 235 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 CST11Q9H112 138 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 BANF2Q9H503 90 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 V9GY05 133 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 FUOMA2VDF0 154 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 M0R1W7 72 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 SLC17A2O00624 439 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 BPNT1O95861 308 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 MGMTP16455 207 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 GADD45AP24522 165 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 ERP29P30040 261 aaKnown RBP11.81□□□□□ -0.52
LIG1-208ENST00000595758 P2RX3P56373 397 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
LIG1-208ENST00000595758 BLMHQ13867 455 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 P2RY14Q15391 338 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 RAB11BQ15907 218 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 TAF9Q16594 264 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 MPV17LQ2QL34 196 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 FAM46BQ96A09 425 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 SELENOIQ9C0D9 397 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 IFT22Q9H7X7 185 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
LIG1-208ENST00000595758 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 hADV38S2A0JD32 116 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 HSPB6O14558 160 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 MPIG6BO95866 241 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 IFNA2P01563 188 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 CSN2P05814 226 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 IGHV4-38-2P0DP08 117 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 VSIG8P0DPA2 414 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 EPHA1P21709 976 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 RANBP1P43487 201 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 OR10A3P58181 314 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 AESQ08117 197 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 ZNF273Q14593 569 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 ATAD3CQ5T2N8 411 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 OR10K2Q6IF99 312 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 VMO1Q7Z5L0 202 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 Q8N7P7 452 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 SUMF2Q8NBJ7 301 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 KCNG3Q8TAE7 436 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 POM121Q96HA1 1249 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 KCTD7Q96MP8 289 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
LIG1-208ENST00000595758 METTL8Q9H825 291 aaKnown RBP11.8□□□□□ -0.52
LIG1-208ENST00000595758 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 ZNF581Q9P0T4 197 aa11.8□□□□□ -0.52
LIG1-208ENST00000595758 TRAV40A0A0B4J280 105 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 hCG_1809904A0A1W2PP81 198 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 A0A1W2PPE2 198 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 A0A1W2PR64 198 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 A0A1W2PRV1 198 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 MEX3AA1L020 520 aaKnown RBP11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A8PA6NJQ4 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 ARSBP15848 533 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 CCL3L1P16619 93 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 RAB3BP20337 219 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 FPR2P25090 351 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 GLIPR1P48060 266 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 QRFPP83859 136 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
LIG1-208ENST00000595758 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 HES5Q5TA89 166 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 METAP1DQ6UB28 335 aaPredicted RBP11.79□□□□□ -0.52
LIG1-208ENST00000595758 GDPGP1Q6ZNW5 385 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 LHX4Q969G2 390 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 YIPF6Q96EC8 236 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 Q96M66 194 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 BARHL1Q9BZE3 327 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 SPACA1Q9HBV2 294 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 LINC00312Q9Y6C7 94 aa11.79□□□□□ -0.52
LIG1-208ENST00000595758 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms