RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HTR1DP28221 377 aa18.92■□□□□ 0.62
LSM4-204ENST00000594828 SLC34A1Q06495 639 aa18.92■□□□□ 0.62
LSM4-204ENST00000594828 ABHD12Q8N2K0 398 aa18.92■□□□□ 0.62
LSM4-204ENST00000594828 CPNE2Q96FN4 548 aaPredicted RBP18.92■□□□□ 0.62
LSM4-204ENST00000594828 F2RL2O00254 374 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 SLC33A1O00400 549 aaPredicted RBP18.91■□□□□ 0.62
LSM4-204ENST00000594828 CSN2P05814 226 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 JUNBP17275 347 aaPredicted RBP18.91■□□□□ 0.62
LSM4-204ENST00000594828 CDK2P24941 298 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 DCKP27707 260 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 SOX2P48431 317 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 MTNR1BP49286 362 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 CDK5R1Q15078 307 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 CCDC58Q4VC31 144 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 KRBOX4Q5JUW0 171 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 PRAMEF5Q5TYX0 476 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 RPL22L1Q6P5R6 122 aaKnown RBP18.91■□□□□ 0.62
LSM4-204ENST00000594828 HEPN1Q6WQI6 88 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 RTN4RL2Q86UN3 420 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 SATL1Q86VE3 508 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 C11orf44Q8N8P7 122 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 GPER1Q99527 375 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 ZNF702PQ9H963 129 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 ING3Q9NXR8 418 aa18.91■□□□□ 0.62
LSM4-204ENST00000594828 ODAMA1E959 279 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 ETV1P50549 477 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 PDLIM3Q53GG5 364 aaPredicted RBP18.9■□□□□ 0.62
LSM4-204ENST00000594828 ELP2Q6IA86 826 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 ZNF529Q6P280 563 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 TMPRSS11AQ6ZMR5 421 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 PXT1Q8NFP0 134 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 OR4P4Q8NGL7 312 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 GPR148Q8TDV2 347 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 CFHR4Q92496 578 aa18.9■□□□□ 0.62
LSM4-204ENST00000594828 RGP1Q92546 391 aaPredicted RBP18.9■□□□□ 0.62
LSM4-204ENST00000594828 NR1H4Q96RI1 486 aaPredicted RBP18.9■□□□□ 0.62
LSM4-204ENST00000594828 TET2Q6N021 2002 aaPredicted RBP18.9■□□□□ 0.62
LSM4-204ENST00000594828 WNK1Q9H4A3 2382 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 IRGMA1A4Y4 181 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 H3BUI4 141 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 CLIC3O95833 236 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 CD2P06729 351 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 HABP2Q14520 560 aaPredicted RBP18.89■□□□□ 0.61
LSM4-204ENST00000594828 ATXN7L3Q14CW9 347 aaPredicted RBP18.89■□□□□ 0.61
LSM4-204ENST00000594828 LRRC36Q1X8D7 754 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 XAF1Q6GPH4 301 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 BAIAP2L2Q6UXY1 529 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 Q8N2B8 174 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 OR51A2Q8NGJ7 313 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 CNIH3Q8TBE1 160 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 ZNF596Q8TC21 504 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 TNFAIP8L1Q8WVP5 186 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 COQ2Q96H96 371 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 PRSS22Q9GZN4 317 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 TAS2R4Q9NYW5 299 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 DPM3Q9P2X0 92 aa18.89■□□□□ 0.61
LSM4-204ENST00000594828 H0YJX3 145 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 PTGFRP43088 359 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 BDH1Q02338 343 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 OR2G6Q5TZ20 316 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 HIST2H2BDQ6DRA6 164 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 OR4D6Q8NGJ1 314 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 CYGBQ8WWM9 190 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 SERTAD4Q9NUC0 356 aa18.88■□□□□ 0.61
LSM4-204ENST00000594828 FAM172BPA6NC97 362 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 FAM90A22PA8MWA6 464 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 GABRPO00591 440 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 GDNFP39905 211 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 TTC23Q5W5X9 447 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 TMEM106AQ96A25 262 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 FAM192AQ9GZU8 254 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 PPIL3Q9H2H8 161 aaKnown RBP18.87■□□□□ 0.61
LSM4-204ENST00000594828 BABAM2Q9NXR7 383 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 OR6C3Q9NZP0 311 aa18.87■□□□□ 0.61
LSM4-204ENST00000594828 ZNF729A6NN14 1252 aaPredicted RBP18.86■□□□□ 0.61
LSM4-204ENST00000594828 LEUTXA8MZ59 168 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 HSPB6O14558 160 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 TOR1AO14656 332 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 MYL12AP19105 171 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 CD34P28906 385 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 BLCAPP62952 87 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 RSU1Q15404 277 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 PAN3Q58A45 887 aaKnown RBP18.86■□□□□ 0.61
LSM4-204ENST00000594828 ZNF565Q8N9K5 539 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 OR51T1Q8NGJ9 327 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 ZNF286AQ9HBT8 521 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 C8orf4Q9NR00 106 aa18.86■□□□□ 0.61
LSM4-204ENST00000594828 DIMT1Q9UNQ2 313 aaKnown RBP18.86■□□□□ 0.61
LSM4-204ENST00000594828 EXOSC1Q9Y3B2 195 aaKnown RBP18.86■□□□□ 0.61
LSM4-204ENST00000594828 SIRT4Q9Y6E7 314 aaPredicted RBP18.86■□□□□ 0.61
LSM4-204ENST00000594828 VWFP04275 2813 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 OGG1O15527 345 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 PEX14O75381 377 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 IGLV1-47P01700 117 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 ALDOBP05062 364 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 BRS3P32247 399 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 PRRX1P54821 245 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 IL13RA2Q14627 380 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 C17orf58Q2M2W7 97 aa18.85■□□□□ 0.61
LSM4-204ENST00000594828 ARSJQ5FYB0 599 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms