RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OR4S1Q8NGB4 309 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 SSMEM1Q8WWF3 244 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CHIAQ9BZP6 476 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CHCHD3Q9NX63 227 aaKnown RBP9.13□□□□□ -0.95
SMAD4-211ENST00000590499 ZNRD1Q9P1U0 126 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 PKD1L1Q8TDX9 2849 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 TRBV5-7A0A0A0MS05 114 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PPH5 198 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 MGST3O14880 152 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 GPX5O75715 221 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 OR2H2O95918 312 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 IGHV4-59P01825 116 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 RBP4P02753 201 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 ALDOBP05062 364 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 CD1AP06126 327 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 FBP1P09467 338 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 ZNF728P0DKX0 622 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 IGFBP3P17936 291 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 LMO1P25800 156 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 SNU13P55769 128 aaKnown RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 WNT4P56705 351 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 TAS2R43P59537 309 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 GRK1Q15835 563 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 Q499Y3 187 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 MIDNQ504T8 468 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 C6orf141Q5SZD1 244 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 ELP2Q6IA86 826 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 Q6P435 159 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 ASCL4Q6XD76 172 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 GDPD3Q7L5L3 318 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 MRPL41Q8IXM3 137 aaKnown RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 NANOGP1Q8N7R0 232 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 Q8NFD4 153 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 C17orf50Q8WW18 174 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 TAF15Q92804 592 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 ORAI1Q96D31 301 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 KRTAP9-3Q9BYQ3 159 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 CHST6Q9GZX3 395 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 GSTK1Q9Y2Q3 226 aa9.12□□□□□ -0.95
SMAD4-211ENST00000590499 SF3B6Q9Y3B4 125 aaKnown RBP9.12□□□□□ -0.95
SMAD4-211ENST00000590499 MEIOCA2RUB1 952 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 SIRPB1O00241 398 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 MYL12BO14950 172 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 CSN2P05814 226 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 CDK1P06493 297 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 MYF6P23409 242 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 GABRR1P24046 479 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 ERP29P30040 261 aaKnown RBP9.11□□□□□ -0.95
SMAD4-211ENST00000590499 MTNR1BP49286 362 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 EDDM3BP56851 147 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 SLC35A2P78381 396 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 FOXL1Q12952 345 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 EDDM3AQ14507 147 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 IRF3Q14653 427 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TAF9Q16594 264 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TPRX1Q8N7U7 411 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 CHST4Q8NCG5 386 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TNFAIP8L1Q8WVP5 186 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 SGCDQ92629 289 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 CPNE2Q96FN4 548 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-211ENST00000590499 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-211ENST00000590499 CDCA4Q9BXL8 241 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 ANKRD60Q9BZ19 345 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 EXOSC4Q9NPD3 245 aaKnown RBP9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TMEM138Q9NPI0 162 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 GLS2Q9UI32 602 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 LSM2Q9Y333 95 aaKnown RBP9.11□□□□□ -0.95
SMAD4-211ENST00000590499 FAM96BQ9Y3D0 163 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 LINC00312Q9Y6C7 94 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 MGAM2Q2M2H8 2515 aa9.11□□□□□ -0.95
SMAD4-211ENST00000590499 TRAV8-7A0A075B6U6 113 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 A0A0G2JK05 382 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 hCG_1809904A0A1W2PP81 198 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PPE2 198 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PR64 198 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 A0A1W2PRV1 198 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 hADV38S2A0JD32 116 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 MEX3AA1L020 520 aaKnown RBP9.1□□□□□ -0.95
SMAD4-211ENST00000590499 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 SLC33A1O00400 549 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-211ENST00000590499 SH2D1BO14796 132 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 PIN1P1O15428 100 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 NDUFA7O95182 113 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 IGHV1-8P0DP01 117 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 COX7A1P24310 79 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 BDKRB2P30411 391 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 PTGFRP43088 359 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 OR3A4PP47883 348 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 BMXP51813 675 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 P2RX3P56373 397 aa9.1□□□□□ -0.95
SMAD4-211ENST00000590499 RPL15P61313 204 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms