RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SLC19A3Q9BZV2 496 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 AUNIPQ9H7T9 357 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 TMEM27Q9HBJ8 222 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 FOXJ3Q9UPW0 622 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 NOSIPQ9Y314 301 aaKnown RBP6.42□□□□□ -1.38
SMAD4-209ENST00000589941 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 A0A0B4J203 849 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 A0A1W2PRG6 482 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 A6NIN4 97 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 SRRM5B3KS81 715 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 C3orf84H3BNL1 204 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 IMPA2O14732 288 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 TSC22D2O75157 780 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 TXNDC12O95881 172 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 HIST1H2ABP04908 130 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 NGFRP08138 427 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 NMBP08949 121 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 CLUP10909 449 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 MAGEB1P43366 347 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 P2RX1P51575 399 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 PRPS1P60891 318 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 RAB14P61106 215 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 SEC61A1P61619 476 aaKnown RBP6.41□□□□□ -1.38
SMAD4-209ENST00000589941 DEFB112Q30KQ8 113 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 LINC01590Q5TEZ4 76 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 TSPO2Q5TGU0 170 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 DPY19L2P2Q6ZN68 376 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 HIST3H2AQ7L7L0 130 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 LRRTM1Q86UE6 522 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 DNAAF1Q8NEP3 725 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 OR4C3Q8NH37 302 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 OR52I2Q8NH67 350 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 SCARB1Q8WTV0 552 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 HIST1H2ACQ93077 130 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 ORAI1Q96D31 301 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 RAB39BQ96DA2 213 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 ALX4Q9H161 411 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-209ENST00000589941 OR51V1Q9H2C8 321 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 OR5V1Q9UGF6 321 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 CYB5R1Q9UHQ9 305 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 PURGQ9UJV8 347 aaKnown RBP6.41□□□□□ -1.38
SMAD4-209ENST00000589941 COPS3Q9UNS2 423 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 RCE1Q9Y256 329 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 WIPI2Q9Y4P8 454 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 V9GY05 133 aa6.41□□□□□ -1.38
SMAD4-209ENST00000589941 TRAV27A0A087WT01 109 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TRAV40A0A0B4J280 105 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 IGHV2OR16-5A0A0B4J2B6 119 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TRAPPC2LH3BP13 241 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 DHHO43323 396 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SYNGR3O43761 229 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SSNA1O43805 119 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 UPK3AO75631 287 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF432O94892 652 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 GLCEO94923 617 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 IGLV1-44P01699 117 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 MRPL3P09001 348 aaKnown RBP6.4□□□□□ -1.38
SMAD4-209ENST00000589941 GKN3PP0CG01 181 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 HIST1H1CP16403 213 aaKnown RBP6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SPI1P17947 270 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SRMP19623 302 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 RAD52P43351 418 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 VEGFCP49767 419 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TMEM33P57088 247 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TSPAN5P62079 268 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF154Q13106 437 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 GPR68Q15743 365 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 ALKBH6Q3KRA9 238 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TP53I3Q53FA7 332 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SLC18B1Q6NT16 456 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 FAM122CQ6P4D5 195 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 ULK3Q6PHR2 472 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 KLHL24Q6TFL4 600 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 CBLN3Q6UW01 205 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 LRRN1Q6UXK5 716 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 BRD3OSQ6XYD6 125 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 C9orf139Q6ZV77 190 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 COX18Q8N8Q8 333 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 LRRC75AQ8NAA5 344 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 CYB561A3Q8NBI2 242 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 FCAMRQ8WWV6 532 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 THRSPQ92748 146 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SGTBQ96EQ0 304 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 OR5B2Q96R09 309 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 TBX15Q96SF7 602 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 DNTTIP1Q9H147 329 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 C1orf198Q9H425 327 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 GPN1Q9HCN4 374 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-209ENST00000589941 NOX4Q9NPH5 578 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 SDHAF2Q9NX18 166 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 MTFP1Q9UDX5 166 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF107Q9UII5 783 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-209ENST00000589941 FZR1Q9UM11 496 aa6.4□□□□□ -1.38
SMAD4-209ENST00000589941 A0A087WUJ7 227 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 TRBV2A0A0J9YWF9 115 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 RBMY1BA6NDE4 496 aaKnown RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 RBMY1EA6NEQ0 496 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms