RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 K7N7A8 449 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 RAB27BO00194 218 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 HSPB6O14558 160 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 CTDSP2O14595 271 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 DVL1O14640 695 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 RGS5O15539 181 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 APOA1P02647 267 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 TK1P04183 234 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
ATG4D-211ENST00000589753 CHATP28329 748 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 OR3A1P47881 315 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 NPY4RP50391 375 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
ATG4D-211ENST00000589753 GRK1Q15835 563 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 MOGAT2Q3SYC2 334 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 ZNF841Q6ZN19 808 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 OR10R2Q8NGX6 335 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 S100A16Q96FQ6 103 aaKnown RBP12.62□□□□□ -0.39
ATG4D-211ENST00000589753 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
ATG4D-211ENST00000589753 CHST6Q9GZX3 395 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 SHARPINQ9H0F6 387 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 MMP27Q9H306 513 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 DIABLOQ9NR28 239 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 CLN8Q9UBY8 286 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 PEX16Q9Y5Y5 336 aa12.62□□□□□ -0.39
ATG4D-211ENST00000589753 FAM25AB3EWG3 89 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 FAM25CB3EWG5 89 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 FAM25GB3EWG6 89 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 MCRIP1C9JLW8 97 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 GLAP06280 429 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 NDUFB7P17568 137 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 ELK1P19419 428 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 IL2RGP31785 369 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 TMEM50BP56557 158 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 GNB2P62879 340 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
ATG4D-211ENST00000589753 WDR25Q64LD2 544 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-211ENST00000589753 BRICD5Q6PL45 260 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 Q6ZTK2 550 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 C6orf201Q7Z4U5 140 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 OR8H2Q8N162 312 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 NEK7Q8TDX7 302 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 ST8SIA4Q92187 359 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 NUDT16L1Q9BRJ7 211 aaKnown RBP12.61□□□□□ -0.39
ATG4D-211ENST00000589753 SSBP3Q9BWW4 388 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-211ENST00000589753 PLEKHJ1Q9NW61 149 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 ADAM30Q9UKF2 790 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 HSF4Q9ULV5 492 aa12.61□□□□□ -0.39
ATG4D-211ENST00000589753 PRRC2AP48634 2157 aaKnown RBP12.6□□□□□ -0.39
ATG4D-211ENST00000589753 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 A6NJ64 397 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 MGST3O14880 152 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 GPR37O15354 613 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 FCN3O75636 299 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 CSN2P05814 226 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 KCNJ3P48549 501 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 ATXN7L3Q14CW9 347 aaPredicted RBP12.6□□□□□ -0.39
ATG4D-211ENST00000589753 GDPD3Q7L5L3 318 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 LAX1Q8IWV1 398 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 FGFRL1Q8N441 504 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 ARHGAP5-AS1Q96IT6 56 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 SULT4A1Q9BR01 284 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 PECRQ9BY49 303 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 MIXL1Q9H2W2 232 aa12.6□□□□□ -0.39
ATG4D-211ENST00000589753 UBE2QL1A1L167 161 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 FAM157AC9JC47 383 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
ATG4D-211ENST00000589753 HIST1H1DP16402 221 aaKnown RBP12.59□□□□□ -0.39
ATG4D-211ENST00000589753 CDK2P24941 298 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 EDDM3AQ14507 147 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 ARL6IP1Q15041 203 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 PLAC9Q5JTB6 97 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 RTN4RL2Q86UN3 420 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 H1FXQ92522 213 aaKnown RBP12.59□□□□□ -0.39
ATG4D-211ENST00000589753 FAAP24Q9BTP7 215 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
ATG4D-211ENST00000589753 TRAV18A0A075B6X5 111 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 FUOMA2VDF0 154 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 A8MXK9 166 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 H7C1Q1 480 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 XRCC3O43542 346 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 FOXH1O75593 365 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 CLPXO76031 633 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 GNB3P16520 340 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 ERP29P30040 261 aaKnown RBP12.58□□□□□ -0.4
ATG4D-211ENST00000589753 S100A5P33763 92 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 TALDO1P37837 337 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 EDDM3BP56851 147 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 AESQ08117 197 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 C11orf91Q3C1V1 193 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
ATG4D-211ENST00000589753 TMEM69Q5SWH9 247 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms