RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RDH10Q8IZV5 341 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 TCEANCQ8N8B7 351 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 CAPSLQ8WWF8 208 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 PP6455Q8WZ26 134 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 C10orf35Q96D05 121 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 PRR25Q96S07 402 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 TBX5Q99593 518 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 H3BUI4 141 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 SLC33A1O00400 549 aaPredicted RBP10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 GNGT2O14610 69 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 FGF16O43320 207 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 APOL3O95236 402 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 IGHG2P01859 326 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 KRT8P05787 483 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CEACAM3P40198 252 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 PTGFRP43088 359 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 ARHGDIBP52566 201 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 GYS2P54840 703 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CBX1P83916 185 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 PDZK1IP1Q13113 114 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CDK5R1Q15078 307 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CCDC144NLQ6NUI1 221 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CHPT1Q8WUD6 406 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 UTP4Q969X6 686 aaKnown RBP10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 CREB3L1Q96BA8 519 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 NSL1Q96IY1 281 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 LRGUKQ96M69 825 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 EXOSC4Q9NPD3 245 aaKnown RBP10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 ZFP57Q9NU63 452 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 SCOCQ9UIL1 159 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 GSTK1Q9Y2Q3 226 aa10.84□□□□□ -0.67
CLPTM1-208ENST00000588274 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 METTL15A6NJ78 407 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ZNF729A6NN14 1252 aaPredicted RBP10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 C3orf84H3BNL1 204 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 SULT1C4O75897 302 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 FAM106CPP0CH98 169 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ATF1P18846 271 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ATP1B3P54709 279 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ACTR3P61158 418 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ZNF85Q03923 595 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 FHL3Q13643 280 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ATXN7L3Q14CW9 347 aaPredicted RBP10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 STPG2Q8N412 459 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 DRAM1Q8N682 238 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 Q8N6K4 173 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 OR10AC1Q8NH08 325 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 LEAP2Q969E1 77 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 TOMM40LQ969M1 308 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 RFT1Q96AA3 541 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 NRBF2Q96F24 287 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 IL4I1Q96RQ9 567 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 MBOAT4Q96T53 435 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 TEX12Q9BXU0 123 aa10.83□□□□□ -0.68
CLPTM1-208ENST00000588274 KBTBD11-OT1A0A1B0GTJ5 212 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 J3QR06 171 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 SH2D1BO14796 132 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 RAMP3O60896 148 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 UBCP0CG48 685 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 CALB2P22676 271 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 MNDAP41218 407 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 MTCP1P56278 107 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 NANOS3P60323 173 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 GNGT1P63211 74 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 CFHR3Q02985 330 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 EBI3Q14213 229 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 LCNL1Q6ZST4 164 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 GID4Q8IVV7 300 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 RNF152Q8N8N0 203 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 OR51A4Q8NGJ6 313 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 OR51T1Q8NGJ9 327 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 SPSB1Q96BD6 273 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 SPACA5Q96QH8 159 aa10.82□□□□□ -0.68
CLPTM1-208ENST00000588274 SERPINE3A8MV23 424 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 NUDT19A8MXV4 375 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 NPIPB11E5RHQ5 1161 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 CCL24O00175 119 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 TOR1AO14656 332 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 ZFPL1O95159 310 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 MT-ND2P03891 347 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 RPLP1P05386 114 aaKnown RBP10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 OR2T7P0C7T2 308 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 HOXB6P17509 224 aaKnown RBP10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 HTR1FP30939 366 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 ZP1P60852 638 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 KRBOX4Q5JUW0 171 aa10.81□□□□□ -0.68
CLPTM1-208ENST00000588274 LHFPL2Q6ZUX7 228 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms