RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CREB3L1Q96BA8 519 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 RCC1LQ96I51 464 aaKnown RBP15.42■□□□□ 0.06
TRAF4-216ENST00000586813 SPACA5Q96QH8 159 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 HHLA2Q9UM44 414 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 ZNF44P15621 663 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 SCN1BQ07699 218 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 KRBOX4Q5JUW0 171 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 RNF144BQ7Z419 303 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 OR51A4Q8NGJ6 313 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 OR10AC1Q8NH08 325 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 COQ2Q96H96 371 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 RHOFQ9HBH0 211 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 OAZ3Q9UMX2 235 aa15.41■□□□□ 0.06
TRAF4-216ENST00000586813 A0A087X0M5 115 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 A0A1B0GX30 115 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 LY6LH3BQJ8 138 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 TOR1AO14656 332 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 SLC16A6O15403 523 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 DUS4LO95620 317 aaKnown RBP15.4■□□□□ 0.06
TRAF4-216ENST00000586813 CLIC3O95833 236 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 MT-ND2P03891 347 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 ATXN7L3Q14CW9 347 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-216ENST00000586813 CCDC144NLQ6NUI1 221 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 KCTD20Q7Z5Y7 419 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 CHST4Q8NCG5 386 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 OR4D6Q8NGJ1 314 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 OR13C3Q8NGS6 347 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 OR13C9Q8NGT0 318 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 NEK6Q9HC98 313 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 INPP5EQ9NRR6 644 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 ING3Q9NXR8 418 aa15.4■□□□□ 0.06
TRAF4-216ENST00000586813 KMT2CQ8NEZ4 4911 aaKnown RBP15.4■□□□□ 0.06
TRAF4-216ENST00000586813 DAPL1A0PJW8 107 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 OOSP1A8MZH6 123 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 J3QRE1 110 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 M0QZK8 103 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 SLC33A1O00400 549 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-216ENST00000586813 MNDAP41218 407 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 OR3A4PP47883 348 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 CCR9P51686 369 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 PRRX1P54821 245 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 KRTAP10-11P60412 298 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 RBM39Q14498 530 aaKnown RBP15.39■□□□□ 0.05
TRAF4-216ENST00000586813 C17orf58Q2M2W7 97 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 C9orf152Q5JTZ5 239 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 VAX1Q5SQQ9 334 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 UTF1Q5T230 341 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 Q6P435 159 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 SAXO1Q8IYX7 474 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 OSR2Q8N2R0 312 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 OSBPL10Q9BXB5 764 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 PPIL3Q9H2H8 161 aaKnown RBP15.39■□□□□ 0.05
TRAF4-216ENST00000586813 IMPAD1Q9NX62 359 aa15.39■□□□□ 0.05
TRAF4-216ENST00000586813 ZNF729A6NN14 1252 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-216ENST00000586813 HTR1AP08908 422 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 BNIP1Q12981 228 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 C1orf146Q5VVC0 180 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 RNFT2Q96EX2 444 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 PELI1Q96FA3 418 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 CENPNQ96H22 339 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-216ENST00000586813 OR6C3Q9NZP0 311 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 MOB4Q9Y3A3 225 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 HSPE1-MOB4S4R3N1 261 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 DNAH9Q9NYC9 4486 aa15.38■□□□□ 0.05
TRAF4-216ENST00000586813 WI2-2373I1.2A0A1W2PRP0 233 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 PSMB11A5LHX3 300 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 SAC3D1A6NKF1 404 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 OR4C45A6NMZ5 311 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 FAM106CPP0CH98 169 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 CDK5R1Q15078 307 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 LINC00482Q8N8I6 264 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 OR9G1Q8NH87 305 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 TRUB1Q8WWH5 349 aaKnown RBP15.37■□□□□ 0.05
TRAF4-216ENST00000586813 TOMM40LQ969M1 308 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 KIRREL1Q96J84 757 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 ZCCHC4Q9H5U6 513 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 MYRFQ9Y2G1 1151 aa15.37■□□□□ 0.05
TRAF4-216ENST00000586813 KBTBD11-OT1A0A1B0GTJ5 212 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 DEGS1O15121 323 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 HCKP08631 526 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 NFYBP25208 207 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 ZP1P60852 638 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 EGFEM1PQ0D2K5 195 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 C11orf87Q6NUJ2 197 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 ETV3LQ6ZN32 361 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 ACBD7Q8N6N7 88 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 RPEQ96AT9 228 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 C4orf36Q96KX1 117 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 PCDHB16Q9NRJ7 776 aa15.36■□□□□ 0.05
TRAF4-216ENST00000586813 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-216ENST00000586813 J3QLW9 94 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 HSPB6O14558 160 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 SNRNP70P08621 437 aaKnown RBP15.35■□□□□ 0.05
TRAF4-216ENST00000586813 CGB3P0DN86 165 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 CGB7P0DN87 165 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 TMEM225BP0DP42 221 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 ZNF19P17023 458 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 HOXD3P31249 432 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-216ENST00000586813 GLP1RP43220 463 aa15.35■□□□□ 0.05
TRAF4-216ENST00000586813 ALKBH1Q13686 389 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms