RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MTCH1Q9NZJ7 389 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CRIM1Q9NZV1 1036 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 KCNIP3Q9Y2W7 256 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 MEMO1Q9Y316 297 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 H7C1Q1 480 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 MSTNO14793 375 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SYNGR1O43759 233 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 NOS1APO75052 506 aaPredicted RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 MPC2O95563 127 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 IFNA2P01563 188 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 IGLV1-44P01699 117 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ACAA1P09110 424 aaPredicted RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 ZNF728P0DKX0 622 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 GLRA1P23415 457 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SERPINF1P36955 418 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 MDH2P40926 338 aaKnown RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ABCA11PQ4W5N1 156 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 FAM76BQ5HYJ3 339 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 CLLU1Q5K131 121 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SPATA46Q5T0L3 261 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 FIP1L1Q6UN15 594 aaKnown RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 ZNF546Q86UE3 836 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SLC51BQ86UW2 128 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 SLC38A6Q8IZM9 456 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 FAM185AQ8N0U4 392 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ZNF610Q8N9Z0 462 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SPERTQ8NA61 448 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 BHLHE23Q8NDY6 225 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 MOB3AQ96BX8 217 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ADAT1Q9BUB4 502 aaKnown RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 SFXN3Q9BWM7 321 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 OR2J1Q9GZK6 312 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ARL6Q9H0F7 186 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 TMEM100Q9NV29 134 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 ZNF629Q9UEG4 869 aaPredicted RBP9.62□□□□□ -0.87
LIG3-204ENST00000585740 PTPRQQ9UMZ3 2332 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 SPTA1P02549 2419 aa9.62□□□□□ -0.87
LIG3-204ENST00000585740 TEX13DA0A0J9YY54 714 aaPredicted RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 LINC00862A6NCI5 91 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 CRYM-AS1A6NIL9 109 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 OR5H1A6NKK0 313 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 CCSO14618 274 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 WISP2O76076 250 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 DIRAS3O95661 229 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 NAPSAO96009 420 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 IFNA21P01568 189 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 PET100P0DJ07 73 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 KITLGP21583 273 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 PSMB6P28072 239 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 FCGR2CP31995 323 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 UBA52P62987 128 aaKnown RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 FOXF2Q12947 444 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 BAMBIQ13145 260 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 EXOSC2Q13868 293 aaKnown RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 OR8G1Q15617 311 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 ZNF718Q3SXZ3 478 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 SHEQ5VZ18 495 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 ACOT7LQ6ZUV0 252 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 OR8H3Q8N146 312 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 KCNRGQ8N5I3 272 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 FAM57AQ8TBR7 257 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 NEK7Q8TDX7 302 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 PPP1R1CQ8WVI7 109 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 DYRK2Q92630 601 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 CYYR1Q96J86 154 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 C2orf50Q96LR7 162 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 SUCNR1Q9BXA5 334 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 Q9N2K0 584 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 TREM2Q9NZC2 230 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 ZNF581Q9P0T4 197 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 PURGQ9UJV8 347 aaKnown RBP9.61□□□□□ -0.87
LIG3-204ENST00000585740 TNFSF18Q9UNG2 199 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 MGAQ8IWI9 3026 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 ATMQ13315 3056 aa9.61□□□□□ -0.87
LIG3-204ENST00000585740 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 KANTRA0A1W2PQU2 76 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 A0A1W2PR80 420 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 TRDCB7Z8K6 153 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 EEF1E1-BLOC1S5C9J1V9 151 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 ERVH48-1M5A8F1 160 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 ZNHIT1O43257 154 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 LILRA1O75019 489 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 KNG1P01042 644 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 CECR9P0C854 216 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 PI3P19957 117 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 GCH1P30793 250 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
LIG3-204ENST00000585740 PSG7Q13046 419 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 DAZAP2Q15038 168 aaPredicted RBP9.6□□□□□ -0.87
LIG3-204ENST00000585740 PDCD1Q15116 288 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 TSC22D1Q15714 1073 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 TIMM23BQ5SRD1 257 aa9.6□□□□□ -0.87
LIG3-204ENST00000585740 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms