RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SCOCQ9UIL1 159 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 ZNF281Q9Y2X9 895 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 A0A0G2JK05 382 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 EFCAB10A6NFE3 127 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 FAM90A8PA6NJQ4 464 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 M0QZ24 198 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 LMO1P25800 156 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 GABRA5P31644 462 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 PROK1P58294 105 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 ZP1P60852 638 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 RSU1Q15404 277 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 FAM189A2Q15884 450 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 SLC35E4Q6ICL7 350 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 PXT1Q8NFP0 134 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 OR52N1Q8NH53 320 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 NDNFQ8TB73 568 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 RPS4Y2Q8TD47 263 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 TNFAIP8L1Q8WVP5 186 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 TMEM106AQ96A25 262 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 S100A13Q99584 98 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 FAM192AQ9GZU8 254 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 TMEM133Q9H2Q1 129 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 TAS2R4Q9NYW5 299 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 CKLFQ9UBR5 152 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
SS18-225ENST00000585121 OGG1O15527 345 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 PAX6P26367 422 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 TAS2R43P59537 309 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 AESQ08117 197 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 SRSF4Q08170 494 aaKnown RBP10.03□□□□□ -0.8
SS18-225ENST00000585121 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 SSX2Q16385 188 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 KCTD21Q4G0X4 260 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 PLA1AQ53H76 456 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 KRBOX4Q5JUW0 171 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 RBM48Q5RL73 367 aaKnown RBP10.03□□□□□ -0.8
SS18-225ENST00000585121 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 ELP2Q6IA86 826 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 C11orf88Q6PI97 169 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 TCF23Q7RTU1 214 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 RNF144BQ7Z419 303 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 GGHQ92820 318 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 CORO2AQ92828 525 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 SMIM19Q96E16 107 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 CDCA4Q9BXL8 241 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 NPFFR1Q9GZQ6 430 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 TMEM138Q9NPI0 162 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 PCDHB16Q9NRJ7 776 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 TAS2R3Q9NYW6 316 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 FBLN5Q9UBX5 448 aa10.03□□□□□ -0.8
SS18-225ENST00000585121 IGHV2-26A0A0B4J1V2 119 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 ODAMA1E959 279 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 VGLL3A8MV65 326 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 SLC33A1O00400 549 aaPredicted RBP10.02□□□□□ -0.8
SS18-225ENST00000585121 ALDOBP05062 364 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 CSN2P05814 226 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 CDK2P24941 298 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 BDKRB2P30411 391 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 GLIPR1P48060 266 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 XAF1Q6GPH4 301 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 ZNF529Q6P280 563 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 Q6P435 159 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 RTN4RL2Q86UN3 420 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 STX19Q8N4C7 294 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 OR4D6Q8NGJ1 314 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 OR51A2Q8NGJ7 313 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 RGP1Q92546 391 aaPredicted RBP10.02□□□□□ -0.8
SS18-225ENST00000585121 GHSRQ92847 366 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 BARHL1Q9BZE3 327 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 METTL9Q9H1A3 318 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 RANBP3Q9H6Z4 567 aaPredicted RBP10.02□□□□□ -0.8
SS18-225ENST00000585121 PAK1IP1Q9NWT1 392 aaPredicted RBP10.02□□□□□ -0.8
SS18-225ENST00000585121 ING3Q9NXR8 418 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 CNOT2Q9NZN8 540 aaKnown RBP10.02□□□□□ -0.8
SS18-225ENST00000585121 OR6C3Q9NZP0 311 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 CLEC2DQ9UHP7 191 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 ING4Q9UNL4 249 aa10.02□□□□□ -0.8
SS18-225ENST00000585121 PKD1L1Q8TDX9 2849 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 F2RL2O00254 374 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 GABRPO00591 440 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 MYL12BO14950 172 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 HTR3BO95264 441 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 CSTBP04080 98 aaKnown RBP10.02□□□□□ -0.81
SS18-225ENST00000585121 HTR1DP28221 377 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ZNF93P35789 620 aaPredicted RBP10.02□□□□□ -0.81
SS18-225ENST00000585121 PTGFRP43088 359 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 KIR2DS4P43632 304 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ARHGDIBP52566 201 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 IL13RA2Q14627 380 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms