RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CHIT1Q13231 466 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 NAB1Q13506 487 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 DOC2AQ14183 400 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 GANABQ14697 944 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 TSNQ15631 228 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 TAF9Q16594 264 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PDK4Q16654 411 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 TATDN3Q17R31 274 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 PYHIN1Q6K0P9 492 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 MED27Q6P2C8 311 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ENPP6Q6UWR7 440 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 DGAT2L6Q6ZPD8 337 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 UTS2BQ765I0 119 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ZNF321PQ8N8H1 164 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 FADS6Q8N9I5 356 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 WFDC11Q8NEX6 87 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 OR52H1Q8NGJ2 320 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 OR4D5Q8NGN0 318 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 STAG3L4Q8TBR4 150 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 SKA2Q8WVK7 121 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 ZCCHC13Q8WW36 166 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 RMND5BQ96G75 393 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 CAPZA3Q96KX2 299 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 RBBP8Q99708 897 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 CCT7Q99832 543 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 RNF5Q99942 180 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 UGT2B28Q9BY64 529 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 STMN4Q9H169 189 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 HEATR1Q9H583 2144 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 RNF122Q9H9V4 155 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 LRTM1Q9HBL6 345 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 NMRAL1Q9HBL8 299 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 EXD2Q9NVH0 621 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 SH3BGRL2Q9UJC5 107 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 GUCA1BQ9UMX6 200 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 SNX12Q9UMY4 172 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 C15orf41Q9Y2V0 281 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 MAP1AP78559 2803 aaPredicted RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 SONP18583 2426 aaKnown RBP1.68□□□□□ -2.14
COPS3-217ENST00000583160 MALRD1Q5VYJ5 2156 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 ATRQ13535 2644 aa1.68□□□□□ -2.14
COPS3-217ENST00000583160 CUBNO60494 3623 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 ALPK2Q86TB3 2170 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 IGKV1D-13A0A0B4J2D9 117 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 A0A1B0GVI7 797 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 A0A1W2PQD3 144 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 SYCE1LA8MT33 242 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 H3BQF6 201 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 GOLGA8MH3BSY2 632 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 FADS1O60427 444 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CDC40O60508 579 aaKnown RBP eCLIP1.67□□□□□ -2.14
COPS3-217ENST00000583160 TBX19O60806 448 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 EEDO75530 441 aaKnown RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 GCM2O75603 506 aaPredicted RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 KLHL2O95198 593 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 GUCA1CO95843 209 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 GUSBP08236 651 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CT62P0C5K7 136 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 IGKV1-13P0DP09 117 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CPMP14384 443 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CSNK2A2P19784 350 aaPredicted RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 CPN2P22792 545 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 PAX7P23759 505 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CRABP2P29373 138 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CD79BP40259 229 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 RFC3P40938 356 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 DSCR4P56555 118 aaPredicted RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 GPX6P59796 221 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 RAB10P61026 200 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 KCNJ2P63252 427 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 PLGLB1Q02325 96 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 IRF8Q02556 426 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CAV1Q03135 178 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 IFT88Q13099 833 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 SLAMF1Q13291 335 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 RCAN2Q14206 197 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 OR4D1Q15615 310 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 OR2A2Q6IF42 318 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 ADNP2Q6IQ32 1131 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 SLC48A1Q6P1K1 146 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 C16orf47Q6ZP98 133 aaPredicted RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 ZNF493Q6ZR52 646 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 PLCZ1Q86YW0 608 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 OTUD6BQ8N6M0 293 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 FAM83FQ8NEG4 500 aaPredicted RBP1.67□□□□□ -2.14
COPS3-217ENST00000583160 OR1J4Q8NGS1 313 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 FAM110BQ8TC76 370 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 NRGNQ92686 78 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CDKL2Q92772 493 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 SGK3Q96BR1 496 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 TM4SF18Q96CE8 201 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 NEURL3Q96EH8 262 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 RILPQ96NA2 401 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 HBEGFQ99075 208 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 SERPINI1Q99574 410 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 CENPKQ9BS16 269 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 ERP44Q9BS26 406 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 DOHHQ9BU89 302 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 OR8D2Q9GZM6 311 aa1.67□□□□□ -2.14
COPS3-217ENST00000583160 C1orf21Q9H246 121 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms