RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PPP1R1CQ8WVI7 109 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 GTF3AQ92664 365 aaKnown RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 SEC22AQ96IW7 307 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 ADAT1Q9BUB4 502 aaKnown RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 C1orf123Q9NWV4 160 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 FAM221AA4D161 298 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 TMEM210A6NLX4 147 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 KNG1P01042 644 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 HOXD4P09016 255 aaPredicted RBP19.33■□□□□ 0.68
CCDC47-204ENST00000582252 ZNF728P0DKX0 622 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 SERPINF1P36955 418 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 RAB14P61106 215 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 RBM39Q14498 530 aaKnown RBP19.33■□□□□ 0.68
CCDC47-204ENST00000582252 FAM169BQ8N8A8 192 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 FAM57AQ8TBR7 257 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 NEK7Q8TDX7 302 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 PIK3IP1Q96FE7 263 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 BCL2L14Q9BZR8 327 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 OPN3Q9H1Y3 402 aaPredicted RBP19.33■□□□□ 0.68
CCDC47-204ENST00000582252 ASF1BQ9NVP2 202 aa19.33■□□□□ 0.68
CCDC47-204ENST00000582252 NBEAQ8NFP9 2946 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-204ENST00000582252 C13orf42A0A1B0GVH6 325 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 TUBAL3A6NHL2 446 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 EEF1E1-BLOC1S5C9J1V9 151 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 UCP3P55916 312 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 ZNF345Q14585 488 aa19.32■□□□□ 0.68
CCDC47-204ENST00000582252 DAZAP2Q15038 168 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-204ENST00000582252 VRK1Q99986 396 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-204ENST00000582252 KIR2DS1A0A191URI9 304 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 F8VVB4 439 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 F8VWA3 439 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 OR2F2O95006 317 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 TIMP3P35625 211 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 KIR2DS4P43632 304 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 HERV-K104P61576 105 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 OR2F1Q13607 317 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 KIR2DS1Q14954 304 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 ABCA11PQ4W5N1 156 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 PRR30Q53SZ7 412 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-204ENST00000582252 FAM76BQ5HYJ3 339 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 GFRALQ6UXV0 394 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 IFT22Q9H7X7 185 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 METTL8Q9H825 291 aaKnown RBP19.31■□□□□ 0.68
CCDC47-204ENST00000582252 KCNIP3Q9Y2W7 256 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 TEX13DA0A0J9YY54 714 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-204ENST00000582252 CRYM-AS1A6NIL9 109 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 OR5H1A6NKK0 313 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 AGFG2O95081 481 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 NAPSAO96009 420 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 IGLV1-44P01699 117 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 RPS2P15880 293 aaKnown RBP19.31■□□□□ 0.68
CCDC47-204ENST00000582252 FCGR2CP31995 323 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 OR8G1Q15617 311 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 SEM1Q6ZVN7 128 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 SLC38A6Q8IZM9 456 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 KLF14Q8TD94 323 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-204ENST00000582252 WDR13Q9H1Z4 485 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 Q9N2K0 584 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 MEMO1Q9Y316 297 aa19.31■□□□□ 0.68
CCDC47-204ENST00000582252 SHANK1Q9Y566 2161 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 PRRG2O14669 202 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 CTXN2P0C2S0 81 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 PSMB6P28072 239 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 PSG7Q13046 419 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 LRRC37A5PQ49AS3 106 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 TOMM40LQ969M1 308 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 MOB3AQ96BX8 217 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 MARS2Q96GW9 593 aaKnown RBP19.3■□□□□ 0.68
CCDC47-204ENST00000582252 SYT3Q9BQG1 590 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 TNFSF18Q9UNG2 199 aa19.3■□□□□ 0.68
CCDC47-204ENST00000582252 POM121CA8CG34 1229 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 CECR9P0C854 216 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 ERVS71-1P61550 626 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 RBPJQ06330 500 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 ANKRD55Q3KP44 614 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 CLLU1Q5K131 121 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 SLC51BQ86UW2 128 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 CCDC71LQ8N9Z2 235 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 C1QTNF6Q9BXI9 259 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 TMEM100Q9NV29 134 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 POLEQ07864 2286 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 CACNA1BQ00975 2339 aa19.29■□□□□ 0.68
CCDC47-204ENST00000582252 DIRAS3O95661 229 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 MDH2P40926 338 aaKnown RBP19.28■□□□□ 0.68
CCDC47-204ENST00000582252 LY6DQ14210 128 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 ZNF718Q3SXZ3 478 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 ACOT7LQ6ZUV0 252 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 SUMF2Q8NBJ7 301 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 INO80EQ8NBZ0 244 aaPredicted RBP19.28■□□□□ 0.68
CCDC47-204ENST00000582252 OR8G5Q8NG78 346 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 SFXN3Q9BWM7 321 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 RDH8Q9NYR8 311 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 PURGQ9UJV8 347 aaKnown RBP19.28■□□□□ 0.68
CCDC47-204ENST00000582252 TRBV6-6A0A0A6YYG2 114 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 PET100P0DJ07 73 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 PIGPP57054 158 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 FXYD4P59646 89 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 FIP1L1Q6UN15 594 aaKnown RBP19.28■□□□□ 0.68
CCDC47-204ENST00000582252 KCNRGQ8N5I3 272 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms