RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 LYNX1P0DP58 116 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 HIST1H1DP16402 221 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 SERPINA2P20848 420 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 COL8A2P25067 703 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 RBMS2Q15434 407 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 CDNFQ49AH0 187 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 PLA1AQ53H76 456 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 PRAMEF6Q5VXH4 476 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 MKXQ8IYA7 352 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 HPSE2Q8WWQ2 592 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 AQP3Q92482 292 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 RAB1CQ92928 201 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 NEDD4LQ96PU5 975 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 SPACA5Q96QH8 159 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 KCNK15Q9H427 330 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 RHOFQ9HBH0 211 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 ETAA1Q9NY74 926 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
CSNK1D-220ENST00000581737 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A18PA6NE21 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A16PA6NEW6 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 HMX3A6NHT5 357 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A20PA6NIJ5 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A8PA6NJQ4 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A12PA8MX19 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A5PA8MXJ8 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF736B4DX44 427 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF732B4DXR9 585 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 HTR3BO95264 441 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A15PP0C7V4 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A13PP0C7W8 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A14PP0C7W9 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM90A24PP0C7X0 464 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 GPM6AP51674 278 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZP1P60852 638 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF154Q13106 437 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ARFRP1Q13795 201 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 SPRNQ5BIV9 151 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 OR10K2Q6IF99 312 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF782Q6ZMW2 699 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF573Q86YE8 665 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 OR5D18Q8NGL1 313 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 DACT3Q96B18 629 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 PRRT1Q99946 306 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 TLNRD1Q9H1K6 362 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 UFSP2Q9NUQ7 469 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 NUDT15Q9NV35 164 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 C1orf123Q9NWV4 160 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 KLK11Q9UBX7 282 aa11.33□□□□□ -0.6
CSNK1D-220ENST00000581737 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 PEX14O75381 377 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 CCNKO75909 580 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 RAB3DO95716 219 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 TAS2R46P59540 309 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 PLA2G7Q13093 441 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 MPPED2Q15777 294 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 C11orf91Q3C1V1 193 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 RNASE10Q5GAN6 216 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM76BQ5HYJ3 339 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 WDR86Q86TI4 376 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 LINC00596Q86U02 117 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 TMEM17Q86X19 198 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 FAM89BQ8N5H3 189 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 REG4Q9BYZ8 158 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 TREM2Q9NZC2 230 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 ZNF221Q9UK13 617 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
CSNK1D-220ENST00000581737 PQLC2LA1A4F0 135 aa11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 J3QT63 122 aa11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 PHF1O43189 567 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 FSTL3O95633 263 aa11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 IFNA6P05013 189 aa11.31□□□□□ -0.6
CSNK1D-220ENST00000581737 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms