RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 GLIPR1P48060 266 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 MEF2CQ06413 473 aaPredicted RBP16.39■□□□□ 0.21
SS18-218ENST00000581021 AESQ08117 197 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 RSU1Q15404 277 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 ACSM3Q53FZ2 586 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 LIPKQ5VXJ0 399 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 LDLRAD3Q86YD5 345 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 TBC1D15Q8TC07 691 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 CCDC90BQ9GZT6 254 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
SS18-218ENST00000581021 GLS2Q9UI32 602 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 FOXJ3Q9UPW0 622 aa16.39■□□□□ 0.21
SS18-218ENST00000581021 MEIOCA2RUB1 952 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 HSPB6O14558 160 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 DEGS1O15121 323 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 MMP23AO75900 390 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 HTR3BO95264 441 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 EEF1B2P24534 225 aaKnown RBP16.38■□□□□ 0.21
SS18-218ENST00000581021 ERP29P30040 261 aaKnown RBP16.38■□□□□ 0.21
SS18-218ENST00000581021 ATXN7L3Q14CW9 347 aaPredicted RBP16.38■□□□□ 0.21
SS18-218ENST00000581021 RBM48Q5RL73 367 aaKnown RBP16.38■□□□□ 0.21
SS18-218ENST00000581021 CHST4Q8NCG5 386 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 OR4D6Q8NGJ1 314 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 MUL1Q969V5 352 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 SLC25A28Q96A46 364 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 CYYR1Q96J86 154 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 ZNF714Q96N38 554 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 ZNRD1Q9P1U0 126 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 ING4Q9UNL4 249 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 LINC00312Q9Y6C7 94 aa16.38■□□□□ 0.21
SS18-218ENST00000581021 A0A1W2PPH5 198 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 hADV38S2A0JD32 116 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 CSN2P05814 226 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 SERPINA2P20848 420 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 IER3P46695 156 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 COMPP49747 757 aaPredicted RBP16.37■□□□□ 0.21
SS18-218ENST00000581021 RBM11P57052 281 aaKnown RBP16.37■□□□□ 0.21
SS18-218ENST00000581021 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
SS18-218ENST00000581021 TPBGQ13641 420 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 IL13RA2Q14627 380 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 LDLRAD2Q5SZI1 272 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 BAIAP2L2Q6UXY1 529 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 LRRTM1Q86UE6 522 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 JAGN1Q8N5M9 183 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 TMEM203Q969S6 136 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 METTL9Q9H1A3 318 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 ING3Q9NXR8 418 aa16.37■□□□□ 0.21
SS18-218ENST00000581021 SF3B6Q9Y3B4 125 aaKnown RBP16.37■□□□□ 0.21
SS18-218ENST00000581021 ODAMA1E959 279 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 RBP4P02753 201 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 HSMCR30P0CW71 290 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 IGHV1-8P0DP01 117 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 HKR1P10072 659 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 GDNFP39905 211 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 TAF9Q16594 264 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 SLC22A6Q4U2R8 563 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 NHLRC3Q5JS37 347 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 TMEM91Q6ZNR0 172 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 MS4A15Q8N5U1 240 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 TMEM86BQ8N661 226 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 SSMEM1Q8WWF3 244 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 UFD1Q92890 307 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 GCDHQ92947 438 aaPredicted RBP16.36■□□□□ 0.21
SS18-218ENST00000581021 MRPS28Q9Y2Q9 187 aaKnown RBP16.36■□□□□ 0.21
SS18-218ENST00000581021 FAM96BQ9Y3D0 163 aa16.36■□□□□ 0.21
SS18-218ENST00000581021 ODF3BA8MYP8 253 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 GEMIN2O14893 280 aaKnown RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 DENRO43583 198 aaKnown RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 FBP1P09467 338 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 MAPK3P27361 379 aaPredicted RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 MLLT11Q13015 90 aaPredicted RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 GPR50Q13585 617 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 TBCEQ15813 527 aaPredicted RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 MIDNQ504T8 468 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 PAN3Q58A45 887 aaKnown RBP16.35■□□□□ 0.21
SS18-218ENST00000581021 UTF1Q5T230 341 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 C16orf87Q6PH81 154 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 GLIPR1L1Q6UWM5 242 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 CEACAM19Q7Z692 300 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 LHFPL4Q7Z7J7 247 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 OSR2Q8N2R0 312 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 PPP1R35Q8TAP8 253 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 PLPPR1Q8TBJ4 325 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 HEXA-AS1Q9H8Q6 139 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 ISYNA1Q9NPH2 558 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 ST3GAL6Q9Y274 331 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 POMT1Q9Y6A1 747 aa16.35■□□□□ 0.21
SS18-218ENST00000581021 FAM181BA6NEQ2 426 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 CLPXO76031 633 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 UCHL1P09936 223 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 CPEP16870 476 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 RELBQ01201 579 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 SSX1Q16384 188 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 AWAT1Q58HT5 328 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 KRBOX4Q5JUW0 171 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 PRAMEF5Q5TYX0 476 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 TRAPPC6BQ86SZ2 158 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 DYNAPQ8N1N2 210 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 TMEM104Q8NE00 496 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 MGLLQ99685 303 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms