RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 RFPL4AL1F8VTS6 287 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 F8VVB4 439 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 F8VWA3 439 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 PGA5P0DJD9 388 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF20P17024 532 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 COX7A1P24310 79 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 AZGP1P25311 298 aaKnown RBP10.83□□□□□ -0.68
TRAF4-214ENST00000580073 BMXP51813 675 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 LOXL3P58215 753 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 TAS2R43P59537 309 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 RPS25P62851 125 aaKnown RBP10.83□□□□□ -0.68
TRAF4-214ENST00000580073 CNN3Q15417 329 aaKnown RBP10.83□□□□□ -0.68
TRAF4-214ENST00000580073 SSX1Q16384 188 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 NSUN5P1Q3KNT7 163 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 FAM27D1Q5T7N8 215 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 LIPKQ5VXJ0 399 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 UNQ9370/PRO34162Q6UXP9 181 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 BATF2Q8N1L9 274 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 Q8N2B8 174 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 GPR148Q8TDV2 347 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 TSEN15Q8WW01 171 aaKnown RBP10.83□□□□□ -0.68
TRAF4-214ENST00000580073 PP6455Q8WZ26 134 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 OR14A2Q96R54 314 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 MGLLQ99685 303 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 PPIL3Q9H2H8 161 aaKnown RBP10.83□□□□□ -0.68
TRAF4-214ENST00000580073 ZCCHC4Q9H5U6 513 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 ISYNA1Q9NPH2 558 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 BLOC1S6Q9UL45 172 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 F2RL2O00254 374 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 MRPS14O60783 128 aaKnown RBP10.82□□□□□ -0.68
TRAF4-214ENST00000580073 SC5DO75845 299 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 INMTO95050 263 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 ARG1P05089 322 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 RPSAP08865 295 aaKnown RBP10.82□□□□□ -0.68
TRAF4-214ENST00000580073 OCM2P0CE71 109 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 HSMCR30P0CW71 290 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 CPEP16870 476 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 IGFBP3P17936 291 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-214ENST00000580073 MPZP25189 248 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 HAAOP46952 286 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 MLLT11Q13015 90 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-214ENST00000580073 KCTD21Q4G0X4 260 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 YIF1BQ5BJH7 314 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF773Q6PK81 442 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 TMEM91Q6ZNR0 172 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 Q6ZPA2 131 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 C17orf50Q8WW18 174 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 TMEM106AQ96A25 262 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 RFT1Q96AA3 541 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 R3HDM4Q96D70 268 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 MALSU1Q96EH3 234 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 AJUBAQ96IF1 538 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 AKR1E2Q96JD6 320 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 DERL3Q96Q80 235 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF702PQ9H963 129 aa10.82□□□□□ -0.68
TRAF4-214ENST00000580073 IGKV1-12A0A0C4DH73 117 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 MEGF11A6BM72 1044 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 CHST1O43916 411 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 NOS1APO75052 506 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-214ENST00000580073 GATBO75879 557 aaKnown RBP10.81□□□□□ -0.68
TRAF4-214ENST00000580073 IGKV1D-12P01611 117 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 TK1P04183 234 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 PRDX2P32119 198 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 VDAC2P45880 294 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-214ENST00000580073 DYNLT3P51808 116 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 FUT6P51993 359 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 Q499Y3 187 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 UBE2UQ5VVX9 321 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 TMEM200BQ69YZ2 307 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF367Q7RTV3 350 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 SERPINA12Q8IW75 414 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
TRAF4-214ENST00000580073 TMEM203Q969S6 136 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 TMED9Q9BVK6 235 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 MTCH1Q9NZJ7 389 aa10.81□□□□□ -0.68
TRAF4-214ENST00000580073 FAM90A8PA6NJQ4 464 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 SULT1B1O43704 296 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 GPX5O75715 221 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 SERPINA3P01011 423 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 CCL3L1P16619 93 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 CD33P20138 364 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 ZP1P60852 638 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 ERVK11-1P61568 191 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 GPR50Q13585 617 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 ACSM3Q53FZ2 586 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF626Q68DY1 528 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF782Q6ZMW2 699 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-214ENST00000580073 GDPD3Q7L5L3 318 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 C16orf82Q7Z2V1 217 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 LYPD6Q86Y78 171 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 CD177Q8N6Q3 437 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 DNAAF1Q8NEP3 725 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 OR4M1Q8NGD0 313 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 OR52N4Q8NGI2 321 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 OR5D14Q8NGL3 314 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 CAPSLQ8WWF8 208 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 NRIP2Q9BQI9 281 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 PKIBQ9C010 78 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms