RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OR5T2Q8NGG2 359 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 MBD6Q96DN6 1003 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 MED30Q96HR3 178 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 SNX22Q96L94 193 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 ABHD1Q96SE0 405 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 SRRQ9GZT4 340 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 FAM234AQ9H0X4 552 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 KAAG1Q9UBP8 84 aa8.98□□□□□ -0.97
SS18-213ENST00000579640 TMEM235A6NFC5 223 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 GABARAPH6UMI1 98 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 TNFRSF13BO14836 293 aaPredicted RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 SIGLEC5O15389 551 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 GSTZ1O43708 216 aaPredicted RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 ZNF737O75373 536 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 CSN2P05814 226 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 RBMXP38159 391 aaKnown RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 GNG2P59768 71 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 IL13RA1P78552 427 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 MRPS15P82914 257 aaKnown RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 ARFRP1Q13795 201 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 CARTPTQ16568 116 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 OR5D13Q8NGL4 314 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 NEK7Q8TDX7 302 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 GAFA1Q96PS6 74 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 SULT4A1Q9BR01 284 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 TMEM246Q9BRR3 403 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 FAAP24Q9BTP7 215 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 CCDC32Q9BV29 185 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 RIMS4Q9H426 269 aaPredicted RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 ZMAT3Q9HA38 289 aaKnown RBP8.97□□□□□ -0.97
SS18-213ENST00000579640 ZNF581Q9P0T4 197 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 KCNK7Q9Y2U2 307 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 AKAP6Q13023 2319 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
SS18-213ENST00000579640 TMEM82A0PJX8 343 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 ISPDA4D126 451 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 POM121CA8CG34 1229 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 H7C1Q1 480 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 K7N7A8 449 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 LPLP06858 475 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 CD3GP09693 182 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 AMY2BP19961 511 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 CBX5P45973 191 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 PAX5Q02548 391 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 MADCAM1Q13477 382 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 DEFB113Q30KQ7 82 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 CLEC2AQ6UVW9 174 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 ZNF525Q8N782 197 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 ASCC1Q8N9N2 400 aaKnown RBP8.96□□□□□ -0.97
SS18-213ENST00000579640 SMIM4Q8WVI0 70 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 FCAMRQ8WWV6 532 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 PERPQ96FX8 193 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 CCL13Q99616 98 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 CMSS1Q9BQ75 279 aaKnown RBP8.96□□□□□ -0.97
SS18-213ENST00000579640 ETAA1Q9NY74 926 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 MIOXQ9UGB7 285 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 AK3Q9UIJ7 227 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 METRNQ9UJH8 293 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 MAB21L2Q9Y586 359 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 DCHS2Q6V1P9 2916 aa8.96□□□□□ -0.97
SS18-213ENST00000579640 LRBAP50851 2863 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 UBE2QL1A1L167 161 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 FUOMA2VDF0 154 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 MGST3O14880 152 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 TMPRSS2O15393 492 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 ADAM20O43506 726 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 PSPNO60542 156 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 OR3A1P47881 315 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 SSBP1Q04837 148 aaKnown RBP8.96□□□□□ -0.98
SS18-213ENST00000579640 AVPI1Q5T686 147 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 C17orf107Q6ZR85 190 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 DNM1P46Q6ZS02 220 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 OR8H2Q8N162 312 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 Q8N402 240 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 GPX8Q8TED1 209 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 FAM168AQ92567 244 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 LURAP1Q96LR2 239 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 PIMREGQ9BSJ6 248 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 CHST6Q9GZX3 395 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 SHARPINQ9H0F6 387 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 PPA2Q9H2U2 334 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 C12orf4Q9NQ89 552 aa8.96□□□□□ -0.98
SS18-213ENST00000579640 CEACAM18A8MTB9 384 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 HSPB6O14558 160 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 NDUFB3O43676 98 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 TK1P04183 234 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 DTYMKP23919 212 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 GRK1Q15835 563 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 LRRC10Q5BKY1 277 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 OLFML2AQ68BL7 652 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 SLC35E4Q6ICL7 350 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 BRICD5Q6PL45 260 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 NLRC3Q7RTR2 1065 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 RTN4RL2Q86UN3 420 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 GAPTQ8N292 157 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 BPIFB2Q8N4F0 458 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 ZNRF1Q8ND25 227 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 TMEM185AQ8NFB2 350 aa8.95□□□□□ -0.98
SS18-213ENST00000579640 OR4S1Q8NGB4 309 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms