RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 CNTD2Q9H8S5 307 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 TREM2Q9NZC2 230 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 TMEM272A0A1B0GTI8 110 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 LEUTXA8MZ59 168 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 PTP4A3O75365 173 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 GLI4P10075 376 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 CPN1P15169 458 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 NAAAQ02083 359 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 ACSF3Q4G176 576 aaPredicted RBP8.9□□□□□ -0.98
MSI2-209ENST00000579483 TEX30Q5JUR7 227 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 C6orf201Q7Z4U5 140 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 OR5AP2Q8NGF4 316 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 OR4A4PQ8NGN8 299 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 OR1L4Q8NGR5 311 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 APH1BQ8WW43 257 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 ZNF552Q9H707 407 aaPredicted RBP8.9□□□□□ -0.98
MSI2-209ENST00000579483 RNF122Q9H9V4 155 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 SMCO4Q9NRQ5 59 aa8.9□□□□□ -0.98
MSI2-209ENST00000579483 RIF1Q5UIP0 2472 aaKnown RBP8.9□□□□□ -0.99
MSI2-209ENST00000579483 LOC105371242A0A075B767 164 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 IGHV3-43A0A0B4J1X8 118 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 K7N7A8 449 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 ARG1P05089 322 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 IGHV3-43DP0DP04 118 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 IAPPP10997 89 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 ELLP55199 621 aaPredicted RBP8.9□□□□□ -0.99
MSI2-209ENST00000579483 MMDQ15546 238 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 ZNF788Q6ZQV5 615 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 CCDC28AQ8IWP9 274 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 FAM168AQ92567 244 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.99
MSI2-209ENST00000579483 PRDM14Q9GZV8 571 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 TAF9BQ9HBM6 251 aa8.9□□□□□ -0.99
MSI2-209ENST00000579483 DVL1O14640 695 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 H2AFB1P0C5Y9 115 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 OR4E1P0C645 316 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 ZNF708P17019 499 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 BCL3P20749 454 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 PMELP40967 661 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DVL1P1P54792 670 aaPredicted RBP8.89□□□□□ -0.99
MSI2-209ENST00000579483 AARDQ4LEZ3 155 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 TMEM104Q8NE00 496 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 SOX15O60248 233 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 IL18BPO95998 194 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 LIPFP07098 398 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 SMIM17P0DL12 118 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 LY6DQ14210 128 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 ZNF273Q14593 569 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 HLXQ14774 488 aaPredicted RBP8.89□□□□□ -0.99
MSI2-209ENST00000579483 SSX1Q16384 188 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DMRTC1Q5HYR2 192 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DMKNQ6E0U4 476 aaPredicted RBP8.89□□□□□ -0.99
MSI2-209ENST00000579483 KCNK17Q96T54 332 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 PFDN5Q99471 154 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 CACNA1GO43497 2377 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 GVINP1Q7Z2Y8 2422 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 GNG7O60262 68 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 SNAPINO95295 136 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 S100A8P05109 93 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 HLA-DRB3P79483 266 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 NCR3LG1Q68D85 454 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DUSP18Q8NEJ0 188 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 PECRQ9BY49 303 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 OTOFQ9HC10 1997 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A10PA6NDY2 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A18PA6NE21 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A16PA6NEW6 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A20PA6NIJ5 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A8PA6NJQ4 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A7PA6NKC0 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A22PA8MWA6 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A12PA8MX19 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A5PA8MXJ8 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A23PA8MXZ1 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 NUPL2O15504 423 aaKnown RBP8.89□□□□□ -0.99
MSI2-209ENST00000579483 UMODP07911 640 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A15PP0C7V4 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A13PP0C7W8 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A14PP0C7W9 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM90A24PP0C7X0 464 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 S100A11P31949 105 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 OPCMLQ14982 345 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 AVPI1Q5T686 147 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DBX2Q6ZNG2 339 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 DHRS9Q9BPW9 319 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
MSI2-209ENST00000579483 RAB29O14966 203 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 TRAPPC2P0DI81 140 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 TRAPPC2BP0DI82 140 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
MSI2-209ENST00000579483 UBE2KP61086 200 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 NHLH1Q02575 133 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 ATP6V1FQ16864 119 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 PCSK4Q6UW60 755 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 ZNF835Q9Y2P0 537 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 CACNA1EQ15878 2313 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 NQO2P16083 231 aa8.88□□□□□ -0.99
MSI2-209ENST00000579483 RPS4Y1P22090 263 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms