RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ARSBP15848 533 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 JUNBP17275 347 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 RAB3BP20337 219 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 KCNJ3P48549 501 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 RBM11P57052 281 aaKnown RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 EDDM3AQ14507 147 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 TAF9Q16594 264 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 PIGYQ3MUY2 71 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 PAN3Q58A45 887 aaKnown RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 ATAD3CQ5T2N8 411 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 GDPGP1Q6ZNW5 385 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 TPRA1Q86W33 373 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 KCTD7Q96MP8 289 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 SELENOIQ9C0D9 397 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 SIRPDQ9H106 197 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 BANF2Q9H503 90 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 IFT22Q9H7X7 185 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 C19orf12Q9NSK7 152 aa9.5□□□□□ -0.89
ERBB2-208ENST00000578630 TXNL4BQ9NX01 149 aaKnown RBP9.5□□□□□ -0.89
ERBB2-208ENST00000578630 A0A1W2PP11 408 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A10PA6NDY2 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A18PA6NE21 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A16PA6NEW6 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A20PA6NIJ5 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A8PA6NJQ4 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A7PA6NKC0 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 TRIM64CA6NLI5 447 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A22PA8MWA6 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A12PA8MX19 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A5PA8MXJ8 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A23PA8MXZ1 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 MCRIP1C9JLW8 97 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 GEMIN2O14893 280 aaKnown RBP9.49□□□□□ -0.89
ERBB2-208ENST00000578630 SLC22A1O15245 554 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 CSN2P05814 226 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A15PP0C7V4 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A13PP0C7W8 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A14PP0C7W9 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 FAM90A24PP0C7X0 464 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 MMP9P14780 707 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 MGMTP16455 207 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 EPHA1P21709 976 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 PRTN3P24158 256 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 OR3A1P47881 315 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 AESQ08117 197 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 RBM39Q14498 530 aaKnown RBP9.49□□□□□ -0.89
ERBB2-208ENST00000578630 RAB11BQ15907 218 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 KRBOX4Q5JUW0 171 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 NCR3LG1Q68D85 454 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 BPIFB2Q8N4F0 458 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 ZNF565Q8N9K5 539 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 CHCHD6Q9BRQ6 235 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 URM1Q9BTM9 101 aaKnown RBP9.49□□□□□ -0.89
ERBB2-208ENST00000578630 DPCDQ9BVM2 203 aaPredicted RBP9.49□□□□□ -0.89
ERBB2-208ENST00000578630 OR51E2Q9H255 320 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 PPA2Q9H2U2 334 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 HEXA-AS1Q9H8Q6 139 aa9.49□□□□□ -0.89
ERBB2-208ENST00000578630 UBE2J1Q9Y385 318 aaPredicted RBP9.49□□□□□ -0.89
ERBB2-208ENST00000578630 TRGV10A0A0A0MS01 117 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 LOC100506127A0A0U1RQW1 187 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 MPIG6BO95866 241 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 FSHBP01225 129 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 GLAP06280 429 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 ZNF728P0DKX0 622 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 VSIG8P0DPA2 414 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 GADD45AP24522 165 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 P2RX3P56373 397 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 FAM189A2Q15884 450 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 C2orf76Q3KRA6 126 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 RBMS3Q6XE24 437 aaKnown RBP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 OR2W3Q7Z3T1 314 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 VMO1Q7Z5L0 202 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 TRAPPC6BQ86SZ2 158 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 SUMF2Q8NBJ7 301 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 TMEM104Q8NE00 496 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 NEK7Q8TDX7 302 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 ZNF418Q8TF45 676 aaPredicted RBP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 CORO2AQ92828 525 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 LHX4Q969G2 390 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 FAM46BQ96A09 425 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 SLC25A28Q96A46 364 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 FAM3DQ96BQ1 224 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 C1orf147Q96MC9 270 aaPredicted RBP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 ZNF714Q96N38 554 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 NCOR1P1Q9H4R4 102 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 ING3Q9NXR8 418 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 OR6C3Q9NZP0 311 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 STEAP1Q9UHE8 339 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 LINC00312Q9Y6C7 94 aa9.48□□□□□ -0.89
ERBB2-208ENST00000578630 NIPBLQ6KC79 2804 aaeCLIP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
ERBB2-208ENST00000578630 NSD1Q96L73 2696 aaPredicted RBP9.47□□□□□ -0.89
ERBB2-208ENST00000578630 TRAV40A0A0B4J280 105 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms