RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 PCDHB16Q9NRJ7 776 aa18.9■□□□□ 0.62
LIMD2-204ENST00000578297 LINC00312Q9Y6C7 94 aa18.9■□□□□ 0.62
LIMD2-204ENST00000578297 A0A0U1RQK1 487 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 NPFFO15130 113 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 MRPS14O60783 128 aaKnown RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 ZNF780AO75290 641 aaPredicted RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 RBP4P02753 201 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 CSTBP04080 98 aaKnown RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 CSN2P05814 226 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 ZNF728P0DKX0 622 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 GP2P55259 537 aaKnown RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 NHLRC3Q5JS37 347 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 JAGN1Q8N5M9 183 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 TPRX1Q8N7U7 411 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 NKAIN3Q8N8D7 197 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 MGLLQ99685 303 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 YTHDF1Q9BYJ9 559 aaKnown RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 HEXA-AS1Q9H8Q6 139 aa18.89■□□□□ 0.61
LIMD2-204ENST00000578297 SF3B6Q9Y3B4 125 aaKnown RBP18.89■□□□□ 0.61
LIMD2-204ENST00000578297 FUOMA2VDF0 154 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 MEGF11A6BM72 1044 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 P2RX3P56373 397 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 ERVFRD-1P60508 538 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 SLC9A3R2Q15599 337 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 TRAM1Q15629 374 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 PIGYQ3MUY2 71 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 TCF23Q7RTU1 214 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 CEACAM19Q7Z692 300 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 OSR2Q8N2R0 312 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 ZNF714Q96N38 554 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 DUX5Q96PT3 197 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 PPA2Q9H2U2 334 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 TCF7L1Q9HCS4 588 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 ACOT13Q9NPJ3 140 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 DNHD1Q96M86 4753 aa18.88■□□□□ 0.61
LIMD2-204ENST00000578297 HOXA3O43365 443 aaPredicted RBP18.87■□□□□ 0.61
LIMD2-204ENST00000578297 RNASE1P07998 156 aaKnown RBP18.87■□□□□ 0.61
LIMD2-204ENST00000578297 SERPINA2P20848 420 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 PSMA1P25786 263 aaKnown RBP18.87■□□□□ 0.61
LIMD2-204ENST00000578297 GPR176Q14439 515 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 FAM27D1Q5T7N8 215 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 ZNF367Q7RTV3 350 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 PHYHIPQ92561 330 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 TMEM203Q969S6 136 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 MUL1Q969V5 352 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 SLC25A28Q96A46 364 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 UQCC2Q9BRT2 126 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 ST3GAL6Q9Y274 331 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 MRPS28Q9Y2Q9 187 aaKnown RBP18.87■□□□□ 0.61
LIMD2-204ENST00000578297 FAM96BQ9Y3D0 163 aa18.87■□□□□ 0.61
LIMD2-204ENST00000578297 TRAV24A0A0B4J272 114 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 A0A1W2PRD5 423 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 A0A1W2PRF3 423 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 A0A1W2PRM7 423 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 MEX3AA1L020 520 aaKnown RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 MELTFP08582 738 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 UCHL1P09936 223 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 SRMP19623 302 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 RBM11P57052 281 aaKnown RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 RPS25P62851 125 aaKnown RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 EMX1Q04741 257 aaPredicted RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 AESQ08117 197 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 GLIPR1L1Q6UWM5 242 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 LINC00596Q86U02 117 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 PNKDQ8N490 385 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 PPIL3Q9H2H8 161 aaKnown RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 IFT22Q9H7X7 185 aa18.86■□□□□ 0.61
LIMD2-204ENST00000578297 UBE2J1Q9Y385 318 aaPredicted RBP18.86■□□□□ 0.61
LIMD2-204ENST00000578297 GTF2F2P13984 249 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 SAA4P35542 130 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 GLIPR1P48060 266 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 SLC22A6Q4U2R8 563 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 MIDNQ504T8 468 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 HSD17B12Q53GQ0 312 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 KRBOX4Q5JUW0 171 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 AWAT2Q6E213 333 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 TMEM91Q6ZNR0 172 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 LRRTM1Q86UE6 522 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 LDLRAD3Q86YD5 345 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 TMEM86BQ8N661 226 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 OR4D6Q8NGJ1 314 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 CORO2AQ92828 525 aa18.85■□□□□ 0.61
LIMD2-204ENST00000578297 FOXRED1Q96CU9 486 aaPredicted RBP18.85■□□□□ 0.61
LIMD2-204ENST00000578297 MEIOCA2RUB1 952 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 FBP1P09467 338 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 IGHV1-8P0DP01 117 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 ACTG1P63261 375 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 ATXN7L3Q14CW9 347 aaPredicted RBP18.84■□□□□ 0.61
LIMD2-204ENST00000578297 PAN3Q58A45 887 aaKnown RBP18.84■□□□□ 0.61
LIMD2-204ENST00000578297 ZNF782Q6ZMW2 699 aaPredicted RBP18.84■□□□□ 0.61
LIMD2-204ENST00000578297 SVOPQ8N4V2 548 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 SSMEM1Q8WWF3 244 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 MRPS24Q96EL2 167 aaKnown RBP18.84■□□□□ 0.61
LIMD2-204ENST00000578297 COQ2Q96H96 371 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 LRRC42Q9Y546 428 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 POMT1Q9Y6A1 747 aa18.84■□□□□ 0.61
LIMD2-204ENST00000578297 TRGV10A0A0A0MS01 117 aa18.83■□□□□ 0.6
LIMD2-204ENST00000578297 A0A1W2PP11 408 aa18.83■□□□□ 0.6
LIMD2-204ENST00000578297 ODAMA1E959 279 aa18.83■□□□□ 0.6
LIMD2-204ENST00000578297 GEMIN2O14893 280 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms