RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 A0A1B0GX12 115 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 IQCF5A8MTL0 148 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 IGLL5B9A064 214 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 C3orf84H3BNL1 204 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CHMP2AO43633 222 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SPOPO43791 374 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 COX7A2P2O60397 106 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 PDCD6O75340 191 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SOD3P08294 240 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 TPM1P09493 284 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 NQO2P16083 231 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CNTFRP26992 372 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 RANBP1P43487 201 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 PSMB2P49721 201 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SLC18A1P54219 525 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 RAB38P57729 211 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 BAXQ07812 192 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SLAMF1Q13291 335 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 VAMP3Q15836 100 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CEACAM21Q3KPI0 293 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 FBXO48Q5FWF7 155 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CLEC12AQ5QGZ9 265 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF470Q6ECI4 717 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CASP12Q6UXS9 341 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 LYPD6Q86Y78 171 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 ST13P4Q8IZP2 240 aaPredicted RBP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 ZNRF2Q8NHG8 242 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 UBA3Q8TBC4 463 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 RNASEH2CQ8TDP1 164 aaKnown RBP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CIDECQ96AQ7 238 aaPredicted RBP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 ZBED3Q96IU2 234 aaPredicted RBP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 BIRC8Q96P09 236 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SERPINB11Q96P15 392 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 CATSPER2Q96P56 530 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 OR2V2Q96R30 315 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 B9D2Q9BPU9 175 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 TAPBPLQ9BX59 468 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 ULBP1Q9BZM6 244 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 TREM1Q9NP99 234 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 RBM22Q9NW64 420 aaKnown RBP eCLIP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SLC22A7Q9Y694 548 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 U3KQK5 164 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 BAZ2AQ9UIF9 1905 aaKnown RBP0.83□□□□□ -2.28
TOP2A-202ENST00000577541 SHANK3Q9BYB0 1731 aa0.83□□□□□ -2.28
TOP2A-202ENST00000577541 DNMT1P26358 1616 aaKnown RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 NPHP4O75161 1426 aaPredicted RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 VWA8A3KMH1 1905 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 MIA3Q5JRA6 1907 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 TRAV8-3A0A0A6YYJ7 113 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 IGHV3-43A0A0B4J1X8 118 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF878C9JN71 531 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 H3BMM0 161 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 C15orf65H3BRN8 121 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 PLPP3O14495 311 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 SCN2BO60939 215 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 TNFAIP8O95379 198 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 CPSF4O95639 269 aaKnown RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 NPPAP01160 153 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 CDK1P06493 297 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 GIMD1P0DJR0 217 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF22P17026 224 aaPredicted RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 MPIP34949 423 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 ARR3P36575 388 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 KCNJ3P48549 501 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 FOXA1P55317 472 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 CD164Q04900 197 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 PRDX1Q06830 199 aaKnown RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 FOXF1Q12946 379 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 BAMBIQ13145 260 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 DHRS2Q13268 280 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 ENDOGQ14249 297 aaKnown RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 CASP8Q14790 479 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 MAPRE2Q15555 327 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 HSP90AA4PQ58FG1 418 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 LAIR2Q6ISS4 152 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 Q6ZRU5 148 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 SCXQ7RTU7 201 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 DPPA2Q7Z7J5 298 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 AMN1Q8IY45 258 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 TCAIMQ8N3R3 496 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 Q8NAQ8 132 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF680Q8NEM1 530 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR8G5Q8NG78 346 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR11G2Q8NGC1 345 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR5H2Q8NGV7 314 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR6K3Q8NGY3 331 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR51Q1Q8NH59 317 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR4A5Q8NH83 315 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 C2orf15Q8WU43 125 aaKnown RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 UBE2WQ96B02 151 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 C19orf60Q96EN9 201 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 IGF2BP2-AS1Q96M15 143 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OLFM3Q96PB7 478 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 KLF6Q99612 283 aaPredicted RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 SLC19A3Q9BZV2 496 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 SLC25A31Q9H0C2 315 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR2D2Q9H210 308 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 OR5V1Q9UGF6 321 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 TAC3Q9UHF0 121 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 THADAQ6YHU6 1953 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms