RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ZIK1Q3SY52 487 aaPredicted RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 CLVS2Q5SYC1 327 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 FAHD1Q6P587 224 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 KCTD18Q6PI47 426 aaPredicted RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 DEGS2Q6QHC5 323 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 ZNF322Q6U7Q0 402 aaPredicted RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 Q6ZTK2 550 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 SSX6Q7RTT6 188 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 TMEM219Q86XT9 240 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 SLC35F2Q8IXU6 374 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 ZNF679Q8IYX0 411 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 TCEANCQ8N8B7 351 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 PAPD5Q8NDF8 572 aaKnown RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 OR5D13Q8NGL4 314 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 OR4C13Q8NGP0 309 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 OR5K1Q8NHB7 308 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 IL4I1Q96RQ9 567 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 TBX5Q99593 518 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 NRIP2Q9BQI9 281 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 C1orf21Q9H246 121 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 RASL12Q9NYN1 266 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 DNAJB9Q9UBS3 223 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 NUFIP1Q9UHK0 495 aaKnown RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 MRM2Q9UI43 246 aaKnown RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 OR52A1Q9UKL2 312 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 POMPQ9Y244 141 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 CHTOPQ9Y3Y2 248 aaKnown RBP5.02□□□□□ -1.61
NUP88-212ENST00000576708 R4GMQ9 66 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 V9GYS6 101 aa5.02□□□□□ -1.61
NUP88-212ENST00000576708 WNK1Q9H4A3 2382 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 IGKV1-27A0A075B6S5 117 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 TCRBV3S1A0A5B6 114 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 SLC1A7O00341 560 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 GYG2O15488 501 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 RPP14O95059 124 aaKnown RBP5.01□□□□□ -1.61
NUP88-212ENST00000576708 TK1P04183 234 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 CHRM2P08172 466 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 LOXL3P58215 753 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 EFNB1P98172 346 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 COL10A1Q03692 680 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 FOXI1Q12951 378 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 FLOT2Q14254 428 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 UBE2V2Q15819 145 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 FAM189A2Q15884 450 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 SMIM21Q3B7S5 101 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 NSUN5P1Q3KNT7 163 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 BCL2L15Q5TBC7 163 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 LCN1P1Q5VSP4 162 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 AADACL4Q5VUY2 407 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 TMEM42Q69YG0 159 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 MEPCEQ7L2J0 689 aaKnown RBP5.01□□□□□ -1.61
NUP88-212ENST00000576708 TCF23Q7RTU1 214 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 ZNF573Q86YE8 665 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 ELMOD2Q8IZ81 293 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 ZNF561Q8N587 486 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 TPRX1Q8N7U7 411 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 OR2T6Q8NHC8 308 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 ASB17Q8WXJ9 295 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 OR5M11Q96RB7 305 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 CNN2Q99439 309 aaKnown RBP5.01□□□□□ -1.61
NUP88-212ENST00000576708 UQCC2Q9BRT2 126 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 TEX12Q9BXU0 123 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 CADM1Q9BY67 442 aaKnown RBP5.01□□□□□ -1.61
NUP88-212ENST00000576708 FAM234AQ9H0X4 552 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 VCX3BQ9H321 246 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 HEXA-AS1Q9H8Q6 139 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 ZNF702PQ9H963 129 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 USE1Q9NZ43 259 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 IL36RNQ9UBH0 155 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 SESN1Q9Y6P5 492 aa5.01□□□□□ -1.61
NUP88-212ENST00000576708 TET2Q6N021 2002 aaPredicted RBP5.01□□□□□ -1.61
NUP88-212ENST00000576708 A6NDX4 124 aa5□□□□□ -1.61
NUP88-212ENST00000576708 FAM90A8PA6NJQ4 464 aa5□□□□□ -1.61
NUP88-212ENST00000576708 ZAR1LA6NP61 321 aa5□□□□□ -1.61
NUP88-212ENST00000576708 C17orf98A8MV24 154 aa5□□□□□ -1.61
NUP88-212ENST00000576708 ZNF670-ZNF695F2Z2N8 137 aa5□□□□□ -1.61
NUP88-212ENST00000576708 K7N7A8 449 aa5□□□□□ -1.61
NUP88-212ENST00000576708 DLGAP1O14490 977 aa5□□□□□ -1.61
NUP88-212ENST00000576708 NOS1APO75052 506 aaPredicted RBP5□□□□□ -1.61
NUP88-212ENST00000576708 ZNF737O75373 536 aa5□□□□□ -1.61
NUP88-212ENST00000576708 MMP23AO75900 390 aa5□□□□□ -1.61
NUP88-212ENST00000576708 SLPIP03973 132 aa5□□□□□ -1.61
NUP88-212ENST00000576708 ARG1P05089 322 aa5□□□□□ -1.61
NUP88-212ENST00000576708 MPZP25189 248 aa5□□□□□ -1.61
NUP88-212ENST00000576708 DUSP1P28562 367 aa5□□□□□ -1.61
NUP88-212ENST00000576708 POLR2IP36954 125 aaKnown RBP5□□□□□ -1.61
NUP88-212ENST00000576708 SNU13P55769 128 aaKnown RBP5□□□□□ -1.61
NUP88-212ENST00000576708 EDDM3BP56851 147 aa5□□□□□ -1.61
NUP88-212ENST00000576708 ERVK11-1P61568 191 aa5□□□□□ -1.61
NUP88-212ENST00000576708 BLCAPP62952 87 aa5□□□□□ -1.61
NUP88-212ENST00000576708 HTD2P86397 168 aa5□□□□□ -1.61
NUP88-212ENST00000576708 DYNC1I2Q13409 638 aaKnown RBP5□□□□□ -1.61
NUP88-212ENST00000576708 EDDM3AQ14507 147 aa5□□□□□ -1.61
NUP88-212ENST00000576708 SSX2Q16385 188 aa5□□□□□ -1.61
NUP88-212ENST00000576708 SLX4IPQ5VYV7 408 aa5□□□□□ -1.61
NUP88-212ENST00000576708 C12orf73Q69YU5 71 aa5□□□□□ -1.61
NUP88-212ENST00000576708 BAIAP2L2Q6UXY1 529 aa5□□□□□ -1.61
NUP88-212ENST00000576708 Q6ZNX1 250 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms