RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PCDHB16Q9NRJ7 776 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 IL36GQ9NZH8 169 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 BLOC1S6Q9UL45 172 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 ZNF780AO75290 641 aaPredicted RBP19.19■□□□□ 0.66
SNF8-217ENST00000576353 CDRT1O95170 752 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 SAA4P35542 130 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 COMPP49747 757 aaPredicted RBP19.19■□□□□ 0.66
SNF8-217ENST00000576353 IL13RA2Q14627 380 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 PRSS48Q7RTY5 328 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 CDH26Q8IXH8 852 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 PNKDQ8N490 385 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 TPRX1Q8N7U7 411 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 ZNF714Q96N38 554 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 CCDC90BQ9GZT6 254 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 DNHD1Q96M86 4753 aa19.19■□□□□ 0.66
SNF8-217ENST00000576353 SLC33A1O00400 549 aaPredicted RBP19.18■□□□□ 0.66
SNF8-217ENST00000576353 HTR3BO95264 441 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 CSTBP04080 98 aaKnown RBP19.18■□□□□ 0.66
SNF8-217ENST00000576353 CSN2P05814 226 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 HKR1P10072 659 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 ACSM3Q53FZ2 586 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 OR10K1Q8NGX5 313 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 NKX3-1Q99801 234 aaPredicted RBP19.18■□□□□ 0.66
SNF8-217ENST00000576353 PPA2Q9H2U2 334 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 DPAGT1Q9H3H5 408 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 TNFRSF19Q9NS68 423 aa19.18■□□□□ 0.66
SNF8-217ENST00000576353 MEX3AA1L020 520 aaKnown RBP19.17■□□□□ 0.66
SNF8-217ENST00000576353 PIN1P1O15428 100 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 IER3P46695 156 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 FOXL1Q12952 345 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 GPR176Q14439 515 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 TRAPPC6BQ86SZ2 158 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 JAGN1Q8N5M9 183 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 UFD1Q92890 307 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 TMED9Q9BVK6 235 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 Q9H521 79 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 ISYNA1Q9NPH2 558 aa19.17■□□□□ 0.66
SNF8-217ENST00000576353 UBE2J1Q9Y385 318 aaPredicted RBP19.17■□□□□ 0.66
SNF8-217ENST00000576353 TRGV10A0A0A0MS01 117 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 MAGEA13PA6NCF6 341 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 MAS1P04201 325 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 IGHV1-8P0DP01 117 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 COX7A1P24310 79 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 AESQ08117 197 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 UNQ9370/PRO34162Q6UXP9 181 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 ZNF782Q6ZMW2 699 aaPredicted RBP19.16■□□□□ 0.66
SNF8-217ENST00000576353 TCF23Q7RTU1 214 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 OSR2Q8N2R0 312 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 NKAIN3Q8N8D7 197 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 OR13D1Q8NGV5 346 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 CHIAQ9BZP6 476 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 ST3GAL6Q9Y274 331 aa19.16■□□□□ 0.66
SNF8-217ENST00000576353 MEGF11A6BM72 1044 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 BTBD17A6NE02 478 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 IGHV4-59P01825 116 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 CRYBA1P05813 215 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 HSMCR30P0CW71 290 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 LGALS4P56470 323 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 PIGYQ3MUY2 71 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 PAN3Q58A45 887 aaKnown RBP19.15■□□□□ 0.66
SNF8-217ENST00000576353 NHLRC3Q5JS37 347 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 KRBOX4Q5JUW0 171 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 TCF7L1Q9HCS4 588 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 ZNRD1Q9P1U0 126 aa19.15■□□□□ 0.66
SNF8-217ENST00000576353 MRPS28Q9Y2Q9 187 aaKnown RBP19.15■□□□□ 0.66
SNF8-217ENST00000576353 GTF2F2P13984 249 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 SERPINA2P20848 420 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 GLIPR1P48060 266 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 TPBGQ13641 420 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 SLC22A6Q4U2R8 563 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 LIPKQ5VXJ0 399 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 LINC00596Q86U02 117 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 CORO2AQ92828 525 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 MUL1Q969V5 352 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 GAL3ST2Q9H3Q3 398 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 TAS2R3Q9NYW6 316 aa19.14■□□□□ 0.65
SNF8-217ENST00000576353 TRAV24A0A0B4J272 114 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 ODAMA1E959 279 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 KCNJ3P48549 501 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 RBM11P57052 281 aaKnown RBP19.13■□□□□ 0.65
SNF8-217ENST00000576353 MLLT11Q13015 90 aaPredicted RBP19.13■□□□□ 0.65
SNF8-217ENST00000576353 INSL4Q14641 139 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 GLIPR1L1Q6UWM5 242 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 CEACAM19Q7Z692 300 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 BEND2Q8NDZ0 799 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 PHYHIPQ92561 330 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 DYRK2Q92630 601 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 COQ2Q96H96 371 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 UQCC2Q9BRT2 126 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 BARHL1Q9BZE3 327 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 IFT22Q9H7X7 185 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 RRP15Q9Y3B9 282 aaKnown RBP19.13■□□□□ 0.65
SNF8-217ENST00000576353 SESN1Q9Y6P5 492 aa19.13■□□□□ 0.65
SNF8-217ENST00000576353 FAM181BA6NEQ2 426 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 HSPB6O14558 160 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 DENRO43583 198 aaKnown RBP19.12■□□□□ 0.65
SNF8-217ENST00000576353 CLPXO76031 633 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 RPL15P61313 204 aaKnown RBP19.12■□□□□ 0.65
SNF8-217ENST00000576353 ATXN7L3Q14CW9 347 aaPredicted RBP19.12■□□□□ 0.65
SNF8-217ENST00000576353 TRAM1Q15629 374 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms