RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 FAM219AQ8IW50 185 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 SLC38A6Q8IZM9 456 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 SUMF2Q8NBJ7 301 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 POC1AQ8NBT0 407 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 C1orf162Q8NEQ5 155 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 NAA60Q9H7X0 242 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 PLSCR4Q9NRQ2 329 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 F5H0A9 414 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 BET1O15155 118 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 OR5AC1P0C628 307 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 S100A10P60903 97 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 IAH1Q2TAA2 248 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 THOC7Q6I9Y2 204 aaKnown RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 PRSS54Q6PEW0 395 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 RDH5Q92781 318 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 CXorf58Q96LI9 332 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 MGAQ8IWI9 3026 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 WDR1O75083 606 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 TNFSF13O75888 250 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 IFNA21P01568 189 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 SCTP09683 121 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 UCP3P55916 312 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 P2RX3P56373 397 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 PSG7Q13046 419 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 IL13RA2Q14627 380 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 SRSF7Q16629 238 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 ALKBH6Q3KRA9 238 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 WDR86Q86TI4 376 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 CXorf67Q86X51 503 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 ZNF610Q8N9Z0 462 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 WDR31Q8NA23 367 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 GALNT14Q96FL9 552 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 PROCRQ9UNN8 238 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 LRP5LA4QPB2 252 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 IQCF6A8MYZ5 107 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 TK1P04183 234 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 GLI4P10075 376 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 ZNF44P15621 663 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 NUP62P37198 522 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 AANATQ16613 207 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 Q6ZS92 163 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 C5orf24Q7Z6I8 188 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 FOXRED2Q8IWF2 684 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 SCCPDHQ8NBX0 429 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 RELL2Q8NC24 303 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 OR11L1Q8NGX0 322 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 SNIP1Q8TAD8 396 aaKnown RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 KLF14Q8TD94 323 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 RRNAD1Q96FB5 475 aaKnown RBP11.97□□□□□ -0.49
VPS33B-208ENST00000574755 POLDIP2Q9Y2S7 368 aa11.97□□□□□ -0.49
VPS33B-208ENST00000574755 TRAV24A0A0B4J272 114 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 SLC34A2O95436 690 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 DIRAS3O95661 229 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 PDGFAP04085 211 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 SELEP16581 610 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 EIF2S3P41091 472 aaKnown RBP11.96□□□□□ -0.49
VPS33B-208ENST00000574755 GGNBP1Q5YKI7 109 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 RGS7BPQ6MZT1 257 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-208ENST00000574755 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 CCDC71LQ8N9Z2 235 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 MRPL24Q96A35 216 aaKnown RBP11.96□□□□□ -0.49
VPS33B-208ENST00000574755 STARD4Q96DR4 205 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 BOD1Q96IK1 185 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.49
VPS33B-208ENST00000574755 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 TRDCB7Z8K6 153 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 MPV17P39210 176 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 ZNF154Q13106 437 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 IL15RAQ13261 267 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 TMEM187Q14656 261 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 OR8G1Q15617 311 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 FAM74A1Q5RGS3 127 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-208ENST00000574755 RHOFQ9HBH0 211 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 RASL12Q9NYN1 266 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.5
VPS33B-208ENST00000574755 MBD3L4A6NDZ8 208 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 MBD3L3A6NE82 208 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 MBD3L5A6NJ08 208 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 CDIPTO14735 213 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 DEGS1O15121 323 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 CECR9P0C854 216 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 LYL1P12980 280 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 HERPUD1Q15011 391 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms