RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 KCNJ8Q15842 424 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 FBXL19-AS1Q494R0 122 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 DHRS11Q6UWP2 260 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 RDH5Q92781 318 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 MRPL24Q96A35 216 aaKnown RBP24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 RANBP3Q9H6Z4 567 aaPredicted RBP24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 TRBV6-6A0A0A6YYG2 114 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR5H14A6NHG9 310 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 ABCD4O14678 606 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 HLA-AP01891 365 aaKnown RBP24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 SHEQ5VZ18 495 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZNF826PQ6ZT77 177 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZNF486Q96H40 463 aaPredicted RBP24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 DHRS9Q9BPW9 319 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 MRPL37Q9BZE1 423 aaKnown RBP24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 TREM2Q9NZC2 230 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 TAAR3PQ9P1P4 343 aa24.64■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZSCAN5BA6NJL1 495 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 HSPB6O14558 160 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR2H2O95918 312 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 MPPED2Q15777 294 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZNF660Q6AZW8 331 aaPredicted RBP24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 Q6ZPA2 131 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 ADAD2Q8NCV1 583 aaKnown RBP24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 ELMOD3Q96FG2 381 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 HYLS1Q96M11 299 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 WFIKKN1Q96NZ8 548 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 WDR13Q9H1Z4 485 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 C5orf66Q9H5L9 145 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 DLL4Q9NR61 685 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 CACNA1AO00555 2505 aa24.63■■□□□ 1.53
CTDNEP1-208ENST00000573600 BSPH1Q075Z2 132 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 PPP1R1AQ13522 171 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 TMEM128Q5BJH2 165 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR10Z1Q8NGY1 313 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 CA10Q9NS85 328 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 DECR2Q9NUI1 292 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 UFSP2Q9NUQ7 469 aa24.62■■□□□ 1.53
CTDNEP1-208ENST00000573600 KIR2DS1A0A191URI9 304 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 C9orf170A2RU37 121 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 H7C1Q1 480 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 GIPP09681 153 aaPredicted RBP24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 AKR1C4P17516 323 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 GLRA1P23415 457 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 KIR2DS4P43632 304 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 IL13RA1P78552 427 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 DHODHQ02127 395 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 KIR2DS1Q14954 304 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 PAN3Q58A45 887 aaKnown RBP24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 NLRC3Q7RTR2 1065 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 UXS1Q8NBZ7 420 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 C1orf123Q9NWV4 160 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 C3orf80F5H4A9 247 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 SLC33A1O00400 549 aaPredicted RBP24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 GSTT2P0CG29 244 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 GLP1RP43220 463 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 ACP7Q6ZNF0 438 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 MRPL30Q8TCC3 161 aaKnown RBP24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 RASL12Q9NYN1 266 aa24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 C14orf166Q9Y224 244 aaKnown RBP24.61■■□□□ 1.53
CTDNEP1-208ENST00000573600 hCG_1807616A0A1W2PRN6 198 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 SMLR1H3BR10 107 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 SIRPB1O00241 398 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR2A4O95047 310 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 HAND1O96004 215 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 CD34P28906 385 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 GMFBP60983 142 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 RNASE6Q93091 150 aaKnown RBP24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 LRRC46Q96FV0 321 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR2A7Q96R45 310 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 RTBDNQ9BSG5 229 aaPredicted RBP24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 ATP23Q9Y6H3 246 aa24.6■■□□□ 1.53
CTDNEP1-208ENST00000573600 DSPP15924 2871 aaKnown RBP24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 PGAM2P15259 253 aa24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 SMIM21Q3B7S5 101 aa24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 ASB13Q8WXK3 278 aa24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 MEGF10Q96KG7 1140 aa24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 POLEQ07864 2286 aa24.59■■□□□ 1.53
CTDNEP1-208ENST00000573600 TRDCB7Z8K6 153 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 SLC22A5O76082 557 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 KNG1P01042 644 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 LMO1P25800 156 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 CFHR2P36980 270 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZNF81P51508 661 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 RAP2BP61225 183 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZNF880Q6PDB4 577 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZFAND1Q8TCF1 268 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 MITD1Q8WV92 249 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 OR2V2Q96R30 315 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 PHB2Q99623 299 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 ESRP2Q9H6T0 727 aaKnown RBP24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 TMEM165Q9HC07 324 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 ZDHHC8Q9ULC8 765 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 CADP27708 2225 aa24.58■■□□□ 1.53
CTDNEP1-208ENST00000573600 VSTM5A8MXK1 200 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 GOSR2O14653 212 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 DUS4LO95620 317 aaKnown RBP24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 CTXN2P0C2S0 81 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 VAMP1P23763 118 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 LILRB4Q8NHJ6 448 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms