RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 BPIFB2Q8N4F0 458 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 Q8NFD4 153 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 LHX4Q969G2 390 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 GFI1Q99684 422 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 UQCC2Q9BRT2 126 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 SLITRK2Q9H156 845 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 KCNK15Q9H427 330 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
CHD3-215ENST00000572750 SOX21Q9Y651 276 aaPredicted RBP12.98□□□□□ -0.33
CHD3-215ENST00000572750 A0A0G2JK05 382 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 MEGF11A6BM72 1044 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 M0R1W7 72 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
CHD3-215ENST00000572750 DEGS1O15121 323 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
CHD3-215ENST00000572750 GPR157Q5UAW9 335 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 CD200R1LQ6Q8B3 271 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 TSPAN14Q8NG11 270 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 OR5D13Q8NGL4 314 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 DMRTB1Q96MA1 342 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 C19orf24Q9BVV8 132 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 ING3Q9NXR8 418 aa12.97□□□□□ -0.33
CHD3-215ENST00000572750 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
CHD3-215ENST00000572750 TRAV24A0A0B4J272 114 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 CENPVL3A0A0U1RRI6 287 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 MGST3O14880 152 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.33
CHD3-215ENST00000572750 OR7C1O76099 320 aaPredicted RBP12.96□□□□□ -0.33
CHD3-215ENST00000572750 GTF2F2P13984 249 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 LMO1P25800 156 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 P2RX3P56373 397 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 AESQ08117 197 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 PAN3Q58A45 887 aaKnown RBP12.96□□□□□ -0.33
CHD3-215ENST00000572750 NHLRC3Q5JS37 347 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 GLT8D1Q68CQ7 371 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 C22orf42Q6IC83 251 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 TMEM104Q8NE00 496 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.33
CHD3-215ENST00000572750 BANF2Q9H503 90 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 ZNF696Q9H7X3 374 aa12.96□□□□□ -0.33
CHD3-215ENST00000572750 IGHV1-69DA0A0B4J2H0 117 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 MDFIC2A0A1B0GVS7 189 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 TRDV1A0A1B0GX56 115 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 A0A1W2PPH5 198 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 SHISA3A0PJX4 238 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 IGHV1-69P01742 117 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 MGMTP16455 207 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 ERVFRD-1P60508 538 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 BLMHQ13867 455 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 GPR176Q14439 515 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 TAF9Q16594 264 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 C1orf100Q5SVJ3 147 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
CHD3-215ENST00000572750 OR10K2Q6IF99 312 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 PNKDQ8N490 385 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 OR6M1Q8NGM8 313 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 FOXRED1Q96CU9 486 aaPredicted RBP12.95□□□□□ -0.34
CHD3-215ENST00000572750 COQ2Q96H96 371 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 METTL8Q9H825 291 aaKnown RBP12.95□□□□□ -0.34
CHD3-215ENST00000572750 PLGRKTQ9HBL7 147 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
CHD3-215ENST00000572750 A0A087WXM4 84 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 A0A1W2PRD5 423 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 A0A1W2PRF3 423 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 A0A1W2PRM7 423 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 hADV38S2A0JD32 116 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 SLC22A1O15245 554 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 TCF21O43680 179 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 CSN2P05814 226 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 FPR2P25090 351 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 HTR2CP28335 458 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 GLIPR1P48060 266 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 DLX6P56179 175 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 OR10A3P58181 314 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 P2RY14Q15391 338 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 KRBOX4Q5JUW0 171 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 ZNF782Q6ZMW2 699 aaPredicted RBP12.94□□□□□ -0.34
CHD3-215ENST00000572750 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 SUMF2Q8NBJ7 301 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 ZNF48Q96MX3 618 aaPredicted RBP12.94□□□□□ -0.34
CHD3-215ENST00000572750 ZNF714Q96N38 554 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
CHD3-215ENST00000572750 SELENOIQ9C0D9 397 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 OR51E2Q9H255 320 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 PCDHB16Q9NRJ7 776 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 LINC00312Q9Y6C7 94 aa12.94□□□□□ -0.34
CHD3-215ENST00000572750 ODAMA1E959 279 aa12.93□□□□□ -0.34
CHD3-215ENST00000572750 SMIM30A4D0T7 59 aa12.93□□□□□ -0.34
CHD3-215ENST00000572750 MPIG6BO95866 241 aa12.93□□□□□ -0.34
CHD3-215ENST00000572750 UBBP0CG47 229 aa12.93□□□□□ -0.34
CHD3-215ENST00000572750 ZNF728P0DKX0 622 aa12.93□□□□□ -0.34
CHD3-215ENST00000572750 GALP22466 123 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms