RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ATXN7L3Q14CW9 347 aaPredicted RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 RSU1Q15404 277 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 GRK1Q15835 563 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 SPIN3Q5JUX0 258 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 C1orf100Q5SVJ3 147 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 LDLRAD2Q5SZI1 272 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 SYT6Q5T7P8 510 aaPredicted RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 METTL11BQ5VVY1 283 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 AWAT2Q6E213 333 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 SIGIRRQ6IA17 410 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 C22orf42Q6IC83 251 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 OR8H2Q8N162 312 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 BPIFB2Q8N4F0 458 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 PIP4P2Q8N4L2 257 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 SVOPQ8N4V2 548 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 PNLDC1Q8NA58 520 aaKnown RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 NANPQ8TBE9 248 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 C17orf50Q8WW18 174 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TAF15Q92804 592 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMG6-209ENST00000571442 LHX4Q969G2 390 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 AJUBAQ96IF1 538 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 FAM234AQ9H0X4 552 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 METTL9Q9H1A3 318 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 OR51E2Q9H255 320 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 ZNF696Q9H7X3 374 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TCF7L1Q9HCS4 588 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 EXOSC4Q9NPD3 245 aaKnown RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 ING3Q9NXR8 418 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 CKLFQ9UBR5 152 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 NUP50Q9UKX7 468 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 ST3GAL6Q9Y274 331 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 A0A0B4J203 849 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 A0A1W2PQ09 198 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 CCRL2O00421 344 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 SH2D1BO14796 132 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 DEGS1O15121 323 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 SLC22A1O15245 554 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 GPR37O15354 613 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 VSIG8P0DPA2 414 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 GADD45AP24522 165 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 RPL31P62899 125 aaKnown RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 IL13RA2Q14627 380 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 P2RY14Q15391 338 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 TAF9Q16594 264 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 C11orf91Q3C1V1 193 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 KRTAP24-1Q3LI83 254 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 NHLRC3Q5JS37 347 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 RSBN1Q5VWQ0 802 aaPredicted RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 FAM53AQ6NSI3 398 aaPredicted RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 ZNF782Q6ZMW2 699 aaPredicted RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 Q6ZPA2 131 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 C5orf24Q7Z6I8 188 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 CDH26Q8IXH8 852 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 OSR2Q8N2R0 312 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 SIGLECL1Q8N7X8 197 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 NKAIN3Q8N8D7 197 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 ZDHHC22Q8N966 263 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 SUMF2Q8NBJ7 301 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 TBC1D15Q8TC07 691 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 PHYHIPQ92561 330 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 DYRK2Q92630 601 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 FAM46BQ96A09 425 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 DUX5Q96PT3 197 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 NICN1Q9BSH3 213 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 TXNL4BQ9NX01 149 aaKnown RBP5.71□□□□□ -1.5
SMG6-209ENST00000571442 KPTNQ9Y664 436 aa5.71□□□□□ -1.5
SMG6-209ENST00000571442 IGHV1-69DA0A0B4J2H0 117 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 A0A0U1RQK1 487 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 C17orf98A8MV24 154 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 TMEM14DPA8MWL7 114 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 M0R1W7 72 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 MGST3O14880 152 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 LDLRAD4O15165 306 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 OR7C1O76099 320 aaPredicted RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 TNFAIP8O95379 198 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 MPIG6BO95866 241 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 IGHV1-69P01742 117 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 CLEC2LP0C7M8 214 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 CGB3P0DN86 165 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 CGB7P0DN87 165 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 SLC2A2P11168 524 aaPredicted RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 MGMTP16455 207 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 PRTN3P24158 256 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 PSMA1P25786 263 aaKnown RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 ERP29P30040 261 aaKnown RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 BMXP51813 675 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 P2RX3P56373 397 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 TRAM1Q15629 374 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 C17orf58Q2M2W7 97 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 DEFB112Q30KQ8 113 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 PAN3Q58A45 887 aaKnown RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 HES5Q5TA89 166 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 GLT8D1Q68CQ7 371 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 FIP1L1Q6UN15 594 aaKnown RBP5.7□□□□□ -1.5
SMG6-209ENST00000571442 C9orf139Q6ZV77 190 aa5.7□□□□□ -1.5
SMG6-209ENST00000571442 GDPD3Q7L5L3 318 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms