RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 OR2M2Q96R28 347 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF300Q96RE9 604 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 LPAR4Q99677 370 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 GFI1Q99684 422 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 QTRT1Q9BXR0 403 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 PECRQ9BY49 303 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 NIPAL2Q9H841 368 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 REEP1Q9H902 201 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 FKRPQ9H9S5 495 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 WFDC1Q9HC57 220 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZBTB20Q9HC78 741 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 PRTFDC1Q9NRG1 225 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ACER3Q9NUN7 267 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 COPZ2Q9P299 210 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 KLHL13Q9P2N7 655 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 KCNE5Q9UJ90 142 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 STUB1Q9UNE7 303 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 C14orf166Q9Y224 244 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 WDR83OSQ9Y284 106 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TRAPPC4Q9Y296 219 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 RPL36Q9Y3U8 105 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 ETV7Q9Y603 341 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF780BQ9Y6R6 833 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ENPP4Q9Y6X5 453 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 FREM1Q5H8C1 2179 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DSPPQ9NZW4 1301 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IGHV3-20A0A0C4DH32 117 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IGHV5-10-1A0A0J9YXX1 117 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF816-ZNF321PA0A0X1KG74 233 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 A0A1B0GU03 582 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TINCRA0A1B0GVN0 87 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ANKRD20A5PA0PJZ0 165 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IRGMA1A4Y4 181 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ARRDC5A6NEK1 342 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 CPSF4LA6NMK7 179 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 B5MCH6 92 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 E5RGE8 158 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 K7ERU9 68 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TP53I11O14683 189 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PHF1O43189 567 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 SPRY2O43597 315 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 MPDU1O75352 247 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ATP5LO75964 103 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TNFSF15O95150 251 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SOX14O95416 240 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ATP1B1P05026 303 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 NGFRP08138 427 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ADRA2AP08913 450 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GKN3PP0CG01 181 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DUX4L4P0CJ87 422 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 LIMS3P0CW19 117 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 LIMS4P0CW20 117 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GLI4P10075 376 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF17P17021 662 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 RPS4Y1P22090 263 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 CBLP22681 906 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 FPR3P25089 353 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GABRA3P34903 492 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IFNGR2P38484 337 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OPRL1P41146 370 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 LEPP41159 167 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 APOBEC1P41238 236 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 AVPR1BP47901 424 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 CRISP3P54108 245 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 BIDP55957 195 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DLX6P56179 175 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TCL1AP56279 114 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PKIAP61925 76 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IGLV3-21P80748 117 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 MRPS10P82664 201 aaKnown RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF155Q12901 538 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 PLA2G7Q13093 441 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR2F1Q13607 317 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ATXN7L3Q14CW9 347 aaPredicted RBP3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR1Q1Q15612 314 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 NSDHLQ15738 373 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 HIST3H3Q16695 136 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 C2orf68Q2NKX9 166 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 FAM214AQ32MH5 1076 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PLPPR5Q32ZL2 321 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TMEM128Q5BJH2 165 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DMRTC1Q5HYR2 192 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR10J3Q5JRS4 329 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 DCST2Q5T1A1 773 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 HIST2H3PS2Q5TEC6 136 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 TMEM236Q5W0B7 351 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 LANCL3Q6ZV70 420 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 B3GNT8Q7Z7M8 397 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 PRR22Q8IZ63 422 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 ABHD12Q8N2K0 398 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR2L13Q8N349 312 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 D2HGDHQ8N465 521 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 SMIM20Q8N5G0 67 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 IQCF1Q8N6M8 205 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 GDPD1Q8N9F7 314 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 THAP8Q8NA92 274 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR52P1PQ8NH57 321 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR4C6Q8NH72 309 aa3.05□□□□□ -1.92
SMG6-208ENST00000570874 OR56B4Q8NH76 319 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms