RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SCD5Q86SK9 330 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ANGPTL5Q86XS5 388 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GABRG1Q8N1C3 465 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 PQLC3Q8N755 202 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 PRELID2Q8N945 189 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 OR9Q1Q8NGQ5 310 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 PHYHIPLQ96FC7 376 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 CCDC32Q9BV29 185 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GABARAPL3Q9BY60 117 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 NXF2Q9GZY0 626 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 CACYBPQ9HB71 228 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 KCNJ16Q9NPI9 418 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 SUPT6HQ7KZ85 1726 aaKnown RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 ABCA9Q8IUA7 1624 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 TRAV25A0A0B4J276 109 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 SIVA1O15304 175 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 YIF1AO95070 293 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 IL1RNP18510 177 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 GSTM3P21266 225 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 MAGEA6P43360 314 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 SRP9P49458 86 aaKnown RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 RGS6P49758 472 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 RPL14P50914 215 aaKnown RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 SLC25A11Q02978 314 aaKnown RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZNF616Q08AN1 781 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 IL18Q14116 193 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 CCSMST1Q4G0I0 132 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 CLEC18BQ6UXF7 455 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 GRINAQ7Z429 371 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 TMEM144Q7Z5S9 345 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 TMEM135Q86UB9 458 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZBTB8OSQ8IWT0 167 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZNF664Q8N3J9 261 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 CBR4Q8N4T8 237 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZNF283Q8N7M2 679 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 OR10W1Q8NGF6 305 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 OR1S1Q8NH92 325 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 TMEM158Q8WZ71 300 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 RAB1CQ92928 201 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 YIPF6Q96EC8 236 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 WFIKKN1Q96NZ8 548 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 KIR3DX1Q9H7L2 352 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 AUNIPQ9H7T9 357 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ACP6Q9NPH0 428 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 DEC1Q9P2X7 70 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZNF646O15015 1829 aaPredicted RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 TTC37Q6PGP7 1564 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ZC3H13Q5T200 1668 aaKnown RBP3.94□□□□□ -1.78
UBR1-208ENST00000569066 CEP152O94986 1710 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 LRRIQ1Q96JM4 1722 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 ANKRD26Q9UPS8 1709 aa3.94□□□□□ -1.78
UBR1-208ENST00000569066 A0A0D9SFI3 127 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CYB5BO43169 146 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 AIREO43918 545 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 BANF1O75531 89 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 SIX6O95475 246 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 IFNA21P01568 189 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 IFNA17P01571 189 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ELK1P19419 428 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CCNOP22674 350 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CRHBPP24387 322 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 RAB9AP51151 201 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 AQP5P55064 265 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 KLF3P57682 345 aaPredicted RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 ARF6P62330 175 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 PAX5Q02548 391 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 IMPG1Q17R60 797 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 TMEM249Q2WGJ8 235 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 PIGGQ5H8A4 983 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR52W1Q6IF63 320 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 LYG2Q86SG7 212 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 LRRC28Q86X40 367 aaPredicted RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 TMEM234Q8WY98 164 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 DNAJC19Q96DA6 116 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 NRIP2Q9BQI9 281 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 GPATCH2LQ9NWQ4 482 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 PSG11Q9UQ72 335 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ATP10BO94823 1461 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CFTRP13569 1480 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ADAMTS13Q76LX8 1427 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ARHGAP23Q9P227 1491 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ZNF99A8MXY4 864 aaPredicted RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 SIRPB1O00241 398 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 C1QCP02747 245 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 BCHEP06276 602 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 KCNE1P15382 129 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 RCC1P18754 421 aaPredicted RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 STOMP27105 288 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 LGALS7P47929 136 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 RAB5CP51148 216 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR2B8PP59922 312 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 UBE2MP61081 183 aaKnown RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 DYNLL1P63167 89 aaKnown RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 MRPS10P82664 201 aaKnown RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 RPL19P84098 196 aaKnown RBP3.93□□□□□ -1.78
UBR1-208ENST00000569066 PYCR3Q53H96 274 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 FAM151BQ6UXP7 276 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ZNF621Q6ZSS3 439 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 SLC35D2Q76EJ3 337 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 SSX7Q7RTT5 188 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms