RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 FUT6P51993 359 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 CDC42P60953 191 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 GNB1P62873 340 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 SCN1BQ07699 218 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 BNIP1Q12981 228 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 ZNF146Q15072 292 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 UBE2V2Q15819 145 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 C17orf58Q2M2W7 97 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 CPOQ8IVL8 374 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 SGPP2Q8IWX5 399 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 Q8IYB0 196 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 ZNF679Q8IYX0 411 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 DDB2Q92466 427 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
CLK3-223ENST00000568488 NSMCE2Q96MF7 247 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 KCTD7Q96MP8 289 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 RASL11BQ9BPW5 248 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 EXOSC4Q9NPD3 245 aaKnown RBP12.55□□□□□ -0.4
CLK3-223ENST00000568488 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 FGFR1OP2Q9NVK5 253 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 GSTK1Q9Y2Q3 226 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
CLK3-223ENST00000568488 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 SH2D1BO14796 132 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 PRODHO43272 600 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 MPZL2O60487 215 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 ENTPD6O75354 484 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 OR2H2O95918 312 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 CYB5AP00167 134 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 PSMB8P28062 276 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 GNG10P50151 68 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 CFHR3Q02985 330 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 LTC4SQ16873 150 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 Q8N1Y9 231 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 Q8N9W7 124 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 HAVCR2Q8TDQ0 301 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
CLK3-223ENST00000568488 BORCS8Q96FH0 119 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 KIRREL1Q96J84 757 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 PLEKHA1Q9HB21 404 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 MAGEL2Q9UJ55 1249 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 OR52A1Q9UKL2 312 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 VSIG4Q9Y279 399 aa12.54□□□□□ -0.4
CLK3-223ENST00000568488 I3L521 148 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 E2F6O75461 281 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 REG1BP48304 166 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 ISL1P61371 349 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 MICAQ29983 383 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 ODF4Q2M2E3 257 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 ELMOD2Q8IZ81 293 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 OR10X1Q8NGY0 326 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 DGCR6LQ9BY27 220 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 KLK15Q9H2R5 256 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
CLK3-223ENST00000568488 DNAH10Q8IVF4 4471 aa12.52□□□□□ -0.4
CLK3-223ENST00000568488 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 KBTBD11-OT1A0A1B0GTJ5 212 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 MAGEA13PA6NCF6 341 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
CLK3-223ENST00000568488 ZNF44P15621 663 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 SLURP1P55000 103 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 ROM1Q03395 351 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 APOFQ13790 326 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 EBI3Q14213 229 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 GINS1Q14691 196 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 HAGHQ16775 308 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 SPIN3Q5JUX0 258 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 ZNF491Q8N8L2 437 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 ARPC1AQ92747 370 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 OR4C12Q96R67 309 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 APOL4Q9BPW4 351 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 NIPSNAP1Q9BPW8 284 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 MOB1AQ9H8S9 216 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 COPS3Q9UNS2 423 aa12.52□□□□□ -0.41
CLK3-223ENST00000568488 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 DHRS7CA6NNS2 312 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 HMGB1P1B2RPK0 211 aaPredicted RBP12.51□□□□□ -0.41
CLK3-223ENST00000568488 GATBO75879 557 aaKnown RBP12.51□□□□□ -0.41
CLK3-223ENST00000568488 LY6G6CO95867 125 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 ARSBP15848 533 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 ZP1P60852 638 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 RUNX1Q01196 453 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
CLK3-223ENST00000568488 ATXN7L3Q14CW9 347 aaPredicted RBP12.51□□□□□ -0.41
CLK3-223ENST00000568488 HAPLN4Q86UW8 402 aa12.51□□□□□ -0.41
CLK3-223ENST00000568488 LYPD6Q86Y78 171 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms