RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 CCDC71LQ8N9Z2 235 aa12.52□□□□□ -0.41
PKM-220ENST00000568459 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
PKM-220ENST00000568459 MSI2Q96DH6 328 aaKnown RBP12.52□□□□□ -0.41
PKM-220ENST00000568459 YPEL4Q96NS1 127 aa12.52□□□□□ -0.41
PKM-220ENST00000568459 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
PKM-220ENST00000568459 EIF5A2Q9GZV4 153 aaKnown RBP12.52□□□□□ -0.41
PKM-220ENST00000568459 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
PKM-220ENST00000568459 PCSK5Q92824 1860 aa12.52□□□□□ -0.41
PKM-220ENST00000568459 UBR5O95071 2799 aaPredicted RBP12.52□□□□□ -0.41
PKM-220ENST00000568459 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 E9PLN8 166 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 OR8U8P0C7N1 319 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 ENDOGQ14249 297 aaKnown RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 SHISA6Q6ZSJ9 500 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 SPSB2Q99619 263 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 METTL7AQ9H8H3 244 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 FLNCQ14315 2725 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 M0R036 132 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 CSNK1A1P48729 337 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 CNN3Q15417 329 aaKnown RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 TMEM156Q8N614 296 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 MAFIPQ8WZ33 124 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 SPTSSAQ969W0 71 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 NABP1Q96AH0 204 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 WDR77Q9BQA1 342 aaPredicted RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
PKM-220ENST00000568459 MYOTQ9UBF9 498 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
PKM-220ENST00000568459 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 A0A1W2PPH5 198 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 CXorf65A6NEN9 183 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 M0R135 149 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 NME2P1O60361 137 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 ANOS1P23352 680 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 GNMTQ14749 295 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
PKM-220ENST00000568459 SP5Q6BEB4 398 aaPredicted RBP12.5□□□□□ -0.41
PKM-220ENST00000568459 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
PKM-220ENST00000568459 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
PKM-220ENST00000568459 LHFPL2Q6ZUX7 228 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 OR5D18Q8NGL1 313 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 ZNF799Q96GE5 643 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 BCO1Q9HAY6 547 aa12.5□□□□□ -0.41
PKM-220ENST00000568459 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 A6NLC8 198 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SHISA8B8ZZ34 492 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 WRBO00258 174 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 FBP1P09467 338 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 MMP9P14780 707 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 FAHP16930 419 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SOX8P57073 446 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
PKM-220ENST00000568459 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 KRBOX4Q5JUW0 171 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 HEPN1Q6WQI6 88 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 FBXW12Q6X9E4 464 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 Q6ZS49 121 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SLC2A9Q9NRM0 540 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 AK3Q9UIJ7 227 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 HS3ST3B1Q9Y662 390 aa12.49□□□□□ -0.41
PKM-220ENST00000568459 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
PKM-220ENST00000568459 A0A1W2PNR3 127 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 ZNF850A8MQ14 1090 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 MSTNO14793 375 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 PITX3O75364 302 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 PRH1P02810 166 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 GABRR1P24046 479 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 ITGA3P26006 1051 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 SFTPDP35247 375 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 CLDN17P56750 224 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
PKM-220ENST00000568459 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms