RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 TSPAN5P62079 268 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 RBM39Q14498 530 aaKnown RBP12.42□□□□□ -0.42
COMMD4-221ENST00000567935 NKPD1Q17RQ9 610 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 FIP1L1Q6UN15 594 aaKnown RBP12.42□□□□□ -0.42
COMMD4-221ENST00000567935 RTN4RL2Q86UN3 420 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 OR11H7Q8NGC8 314 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 RND1Q92730 232 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 HYLS1Q96M11 299 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 FYTTD1Q96QD9 318 aaKnown RBP12.42□□□□□ -0.42
COMMD4-221ENST00000567935 DHRS9Q9BPW9 319 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 SULT4A1Q9BR01 284 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 RANBP3Q9H6Z4 567 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF442Q9H7R0 627 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 BEX1Q9HBH7 125 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF69Q9UC07 566 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 TINAGQ9UJW2 476 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
COMMD4-221ENST00000567935 HEATR1Q9H583 2144 aaKnown RBP12.41□□□□□ -0.42
COMMD4-221ENST00000567935 M0R1B8 84 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 SYNGR1O43759 233 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 NOS1APO75052 506 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-221ENST00000567935 CSN2P05814 226 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 OR4E1P0C645 316 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 FPR2P25090 351 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 CALCRP30988 508 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 MPV17P39210 176 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 GZMKP49863 264 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF83P51522 516 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 ARPC4P59998 168 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 MPPED2Q15777 294 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 OVCH2Q7RTZ1 564 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 LHFPL1Q86WI0 220 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 NRGNQ92686 78 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 SPOCK3Q9BQ16 436 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 EHFQ9NZC4 300 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF222Q9UK12 451 aa12.41□□□□□ -0.42
COMMD4-221ENST00000567935 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 H7C1Q1 480 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-221ENST00000567935 PGA5P0DJD9 388 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF250P15622 560 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 PRKACAP17612 351 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 CA7P43166 264 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 ERVK11-1P61568 191 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 NKX6-1P78426 367 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF154Q13106 437 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 SPIN3Q5JUX0 258 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 PEG10Q86TG7 708 aaKnown RBP12.4□□□□□ -0.42
COMMD4-221ENST00000567935 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 DMRTB1Q96MA1 342 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 NRIP2Q9BQI9 281 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 ZNF436Q9C0F3 470 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-221ENST00000567935 TLNRD1Q9H1K6 362 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 MGAT4CQ9UBM8 478 aa12.4□□□□□ -0.42
COMMD4-221ENST00000567935 TRBV6-6A0A0A6YYG2 114 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 IGHV3-13P01766 116 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 PTAFRP25105 342 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 MDH2P40926 338 aaKnown RBP12.39□□□□□ -0.43
COMMD4-221ENST00000567935 SELENOVP59797 346 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 RAP2BP61225 183 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 IKZF1Q13422 519 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 DAZAP2Q15038 168 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-221ENST00000567935 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 SHEQ5VZ18 495 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 TMED4Q7Z7H5 227 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 LYG2Q86SG7 212 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 ZBTB8BQ8NAP8 495 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-221ENST00000567935 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 TMEM185AQ8NFB2 350 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 NUP37Q8NFH4 326 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 OR2AK2Q8NG84 335 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF486Q96H40 463 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-221ENST00000567935 SMR3AQ99954 134 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 FOXC2Q99958 501 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 NGBQ9NPG2 151 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 TREM2Q9NZC2 230 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 GLS2Q9UI32 602 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 GPR132Q9UNW8 380 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
COMMD4-221ENST00000567935 KIR2DS1A0A191URI9 304 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 OR2AT4A6NND4 320 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 OR2A4O95047 310 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 CLDN14O95500 239 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 NAPSAO96009 420 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms