RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SLIT2O94813 1529 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 USP42Q9H9J4 1324 aaKnown RBP3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SCO1O75880 301 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CIAO1O76071 339 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CYB5R3P00387 301 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CMC4P56277 68 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-209ENST00000566240 DMC1Q14565 340 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 PMVKQ15126 192 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 C5orf47Q569G3 176 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CLEC19AQ6UXS0 136 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 Q6ZT83 130 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 AHSA2Q719I0 299 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 LRRC6Q86X45 466 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 BBS7Q8IWZ6 715 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CCNYL1Q8N7R7 359 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SLC25A29Q8N8R3 303 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 OR8G5Q8NG78 346 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 OR2M7Q8NG81 312 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 OR4K2Q8NGD2 314 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 OR5M1Q8NGP8 315 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 IFT81Q8WYA0 676 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 ESR2Q92731 530 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 GTF2H4Q92759 462 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 HGDQ93099 445 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SMIM8Q96KF7 97 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 DOK1Q99704 481 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 BBS2Q9BXC9 721 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SHCBP1LQ9BZQ2 653 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SIRT7Q9NRC8 400 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 FBXO6Q9NRD1 293 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-209ENST00000566240 OPN4Q9UHM6 478 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 CBY1Q9Y3M2 126 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 SBF2Q86WG5 1849 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 DOCK2Q92608 1830 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 LAMB1P07942 1786 aa3.05□□□□□ -1.92
CNOT1-209ENST00000566240 NUP214P35658 2090 aaPredicted RBP3.04□□□□□ -1.92
CNOT1-209ENST00000566240 CCDC171Q6TFL3 1326 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 LOC102724200A0A096LPH7 203 aaPredicted RBP3.04□□□□□ -1.92
CNOT1-209ENST00000566240 A0A0G2JMP0 313 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 A0A0X1KG70 313 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 BRI3O95415 125 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 HLA-GP17693 338 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 RAB38P57729 211 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 TAS2R43P59537 309 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 TRDNQ13061 729 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 MAPRE2Q15555 327 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 CEACAM16Q2WEN9 425 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 ABCA11PQ4W5N1 156 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 HBMQ6B0K9 141 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 ERICH5Q6P6B1 374 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 UGT2A3Q6UWM9 527 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 COMTD1Q86VU5 262 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 LRRC52Q8N7C0 313 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 CLHC1Q8NHS4 586 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 OR10C1Q96KK4 312 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 SPACA5Q96QH8 159 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 MRPL20Q9BYC9 149 aaKnown RBP3.04□□□□□ -1.92
CNOT1-209ENST00000566240 TBL1XR1Q9BZK7 514 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 NXF2Q9GZY0 626 aaKnown RBP3.04□□□□□ -1.92
CNOT1-209ENST00000566240 IFT46Q9NQC8 304 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 NRBP2Q9NSY0 501 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 TAS2R5Q9NYW4 299 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 TMEM131Q92545 1883 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 KIAA1551Q9HCM1 1747 aa3.04□□□□□ -1.92
CNOT1-209ENST00000566240 RGPD3A6NKT7 1758 aaPredicted RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 RGPD4Q7Z3J3 1758 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 IGLV4-60A0A075B6I1 120 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 GOLGA6L4A6NEF3 574 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TRPC5OSA6NMA1 111 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 SGCEO43556 437 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 SHOX2O60902 331 aaPredicted RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 DHRS3O75911 302 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 MPZL1O95297 269 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 RLN2P04090 185 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 IGKV5-2P06315 115 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 OR4Q2P0C623 313 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TAC1P20366 129 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 MAGEA6P43360 314 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TUFMP49411 452 aaKnown RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 XKP51811 444 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 RPL10AP62906 217 aaKnown RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 PITPNAQ00169 270 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 ZNF816Q0VGE8 651 aaPredicted RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TPBGQ13641 420 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 SHHQ15465 462 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 OR4D1Q15615 310 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TRAM1Q15629 374 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 BSXQ3C1V8 233 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 SHISA6Q6ZSJ9 500 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 TMEM25Q86YD3 366 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 CYP4Z2PQ8N1L4 340 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 SPICQ8N5J4 248 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 RNF10Q8N5U6 811 aaKnown RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 PDCD6IPQ8WUM4 868 aaKnown RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 ORAOV1Q8WV07 137 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 OR5P2Q8WZ92 322 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms