RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 NEDD8Q15843 81 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 GPR157Q5UAW9 335 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 TMEM200BQ69YZ2 307 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 Q8N7P7 452 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 OR6M1Q8NGM8 313 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 FUOMA2VDF0 154 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 TRIM64CA6NLI5 447 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 RBP4P02753 201 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 IGHV4-38-2P0DP08 117 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 PSMD7P51665 324 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 P2RX3P56373 397 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 EDDM3BP56851 147 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 VMO1Q7Z5L0 202 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 OR4M1Q8NGD0 313 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 NR1H4Q96RI1 486 aaPredicted RBP17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 CST11Q9H112 138 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 STUB1Q9UNE7 303 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 LINC00312Q9Y6C7 94 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 A0A1W2PP11 408 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A10PA6NDY2 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A18PA6NE21 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A16PA6NEW6 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A20PA6NIJ5 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A8PA6NJQ4 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A7PA6NKC0 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A22PA8MWA6 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A12PA8MX19 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A5PA8MXJ8 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A23PA8MXZ1 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A15PP0C7V4 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A13PP0C7W8 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A14PP0C7W9 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM90A24PP0C7X0 464 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 FPR2P25090 351 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 HTR2CP28335 458 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 RANBP1P43487 201 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 KCNJ3P48549 501 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 SCN1BQ07699 218 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 GFI1Q99684 422 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 PPA2Q9H2U2 334 aa17.3■□□□□ 0.36
SHCBP1-205ENST00000566016 COL6A5A8TX70 2615 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 A0A0A6YYJ9 748 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 TRAV24A0A0B4J272 114 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 hCG_1809904A0A1W2PP81 198 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 A0A1W2PPE2 198 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 A0A1W2PR64 198 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 A0A1W2PRV1 198 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 hADV38S2A0JD32 116 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 SLC17A2O00624 439 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 GEMIN2O14893 280 aaKnown RBP17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 OR7C1O76099 320 aaPredicted RBP17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 MGMTP16455 207 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 PRTN3P24158 256 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 MYL9P24844 172 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 CFPP27918 469 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 EDDM3AQ14507 147 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 ZNF273Q14593 569 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 NCR3LG1Q68D85 454 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 USP43Q70EL4 1123 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 TNFRSF14Q92956 283 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 ZNF69Q9UC07 566 aa17.29■□□□□ 0.36
SHCBP1-205ENST00000566016 CENPVL3A0A0U1RRI6 287 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 BPNT1O95861 308 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 DLX6P56179 175 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 PAN3Q58A45 887 aaKnown RBP17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 TCF23Q7RTU1 214 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 BPIFB2Q8N4F0 458 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 C11orf42Q8N5U0 333 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 TMEM104Q8NE00 496 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 Q96M66 194 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 NCOR1P1Q9H4R4 102 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 SPACA1Q9HBV2 294 aa17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 RCC2Q9P258 522 aaKnown RBP17.28■□□□□ 0.36
SHCBP1-205ENST00000566016 C17orf98A8MV24 154 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 PDCD5O14737 125 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 ZNF728P0DKX0 622 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 GUCA2AQ02747 115 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 C22orf42Q6IC83 251 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 COQ2Q96H96 371 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 ZNF714Q96N38 554 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 SUCNR1Q9BXA5 334 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 MS4A7Q9GZW8 240 aaPredicted RBP17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 PLGRKTQ9HBL7 147 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 SIRT7Q9NRC8 400 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 TXNL4BQ9NX01 149 aaKnown RBP17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 SSR3Q9UNL2 185 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 UBE2J1Q9Y385 318 aaPredicted RBP17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 AK6Q9Y3D8 172 aaKnown RBP17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 V9GY05 133 aa17.27■□□□□ 0.36
SHCBP1-205ENST00000566016 IGHV1-69DA0A0B4J2H0 117 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 SHISA3A0PJX4 238 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 H3BUI4 141 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 CRTAPO75718 401 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 IGHV1-69P01742 117 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 VSIG8P0DPA2 414 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 JUNBP17275 347 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 AESQ08117 197 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 ATXN7L3Q14CW9 347 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 TAF9Q16594 264 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 KCNG3Q8TAE7 436 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms