RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 HTR1DP28221 377 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 BRS3P32247 399 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 HCCSP53701 268 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 ROM1Q03395 351 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 ABCA11PQ4W5N1 156 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 KCTD18Q6PI47 426 aaPredicted RBP10.13□□□□□ -0.79
RNF40-208ENST00000565995 GDPD3Q7L5L3 318 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 FAM220AQ7Z4H9 259 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 KRT77Q7Z794 578 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 OSR2Q8N2R0 312 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 ACBD7Q8N6N7 88 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 TSPAN14Q8NG11 270 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 OR51E1Q8TCB6 317 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 SNX22Q96L94 193 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 P2RX4Q99571 388 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 MNTQ99583 582 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 PBOV1Q9GZY1 135 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 DUSP21Q9H596 190 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 VCX3AQ9NNX9 186 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 FGF20Q9NP95 211 aaPredicted RBP10.13□□□□□ -0.79
RNF40-208ENST00000565995 MRPS18AQ9NVS2 196 aaKnown RBP10.13□□□□□ -0.79
RNF40-208ENST00000565995 FKBP14Q9NWM8 211 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 NUFIP1Q9UHK0 495 aaKnown RBP10.13□□□□□ -0.79
RNF40-208ENST00000565995 A0A1W2PQL4 384 aaPredicted RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 DHRS7CA6NNS2 312 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 M0QZK8 103 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ZNF254O75437 659 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 SRSF10O75494 262 aaKnown RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 IGLV1-47P01700 117 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 IGHA1P01876 353 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 C21orf33P30042 268 aaPredicted RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 MYCNOSP40205 109 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 RPL23AP62750 156 aaKnown RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 DGCR2P98153 550 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 BDH1Q02338 343 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 CLVS2Q5SYC1 327 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ZNF773Q6PK81 442 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ZNF322Q6U7Q0 402 aaPredicted RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 UNQ9370/PRO34162Q6UXP9 181 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 PRSS48Q7RTY5 328 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 RTN4RL2Q86UN3 420 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 LHFPL3Q86UP9 236 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 SVOPQ8N4V2 548 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ZNF676Q8N7Q3 588 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 NDNFQ8TB73 568 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
RNF40-208ENST00000565995 ALG8Q9BVK2 526 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 MND1Q9BWT6 205 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ZFP57Q9NU63 452 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 COPS3Q9UNS2 423 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 ERGIC3Q9Y282 383 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 V9GYS6 101 aa10.12□□□□□ -0.79
RNF40-208ENST00000565995 A0A087WXM4 84 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 TMEM82A0PJX8 343 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 PSMD9O00233 223 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 TTRP02766 147 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 KRT8P05787 483 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
RNF40-208ENST00000565995 ETV1P50549 477 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 GP2P55259 537 aaKnown RBP10.11□□□□□ -0.79
RNF40-208ENST00000565995 EDDM3BP56851 147 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 ZNF85Q03923 595 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 TMPRSS11AQ6ZMR5 421 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 ZNF679Q8IYX0 411 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 YIPF7Q8N8F6 280 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 ASB17Q8WXJ9 295 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 MROQ9BYG7 248 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 MTCH1Q9NZJ7 389 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 GNG8Q9UK08 70 aa10.11□□□□□ -0.79
RNF40-208ENST00000565995 UBE2J1Q9Y385 318 aaPredicted RBP10.11□□□□□ -0.79
RNF40-208ENST00000565995 A0A1B0GTI1 187 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 LEUTXA8MZ59 168 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 F8VVB4 439 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 F8VWA3 439 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 LY6LH3BQJ8 138 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 J3QLW9 94 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 J3QRE1 110 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
RNF40-208ENST00000565995 HTR1AP08908 422 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 LIMS3P0CW19 117 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 LIMS4P0CW20 117 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 ZNF19P17023 458 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 CD24P25063 80 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 CD34P28906 385 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 MAP2K4P45985 399 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 ARHGDIBP52566 201 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 GALEQ14376 348 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 MED22Q15528 200 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 NEDD8Q15843 81 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 TP53I3Q53FA7 332 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 OR52W1Q6IF63 320 aa10.1□□□□□ -0.79
RNF40-208ENST00000565995 PLEKHG7Q6ZR37 379 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms