RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ALDOBP05062 364 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 FAM90A15PP0C7V4 464 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 FAM90A13PP0C7W8 464 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 FAM90A14PP0C7W9 464 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 FAM90A24PP0C7X0 464 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 CGB3P0DN86 165 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 CGB7P0DN87 165 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 CD33P20138 364 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 PRKACBP22694 351 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 ATP6V1E1P36543 226 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 CCR9P51686 369 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 KRTAP10-11P60412 298 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 CDK5R1Q15078 307 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 ABCA11PQ4W5N1 156 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 ARSJQ5FYB0 599 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-213ENST00000565173 SLC25A30Q5SVS4 291 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 TPTE2P1Q5T6R2 138 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 OR52W1Q6IF63 320 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 KCTD20Q7Z5Y7 419 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 TRAPPC6BQ86SZ2 158 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 PQLC1Q8N2U9 271 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF596Q8TC21 504 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 TRUB1Q8WWH5 349 aaKnown RBP6.83□□□□□ -1.32
CAPN3-213ENST00000565173 RFKQ969G6 155 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 MYDGFQ969H8 173 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 RFT1Q96AA3 541 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 COQ2Q96H96 371 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 OPALINQ96PE5 141 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 SPACA5Q96QH8 159 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 SLC25A33Q9BSK2 321 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 GAL3ST2Q9H3Q3 398 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 RIBC2Q9H4K1 309 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 EXOSC4Q9NPD3 245 aaKnown RBP6.83□□□□□ -1.32
CAPN3-213ENST00000565173 GLS2Q9UI32 602 aa6.83□□□□□ -1.32
CAPN3-213ENST00000565173 TSSC4Q9Y5U2 329 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-213ENST00000565173 RYR3Q15413 4870 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 TRGV10A0A0A0MS01 117 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 ODAMA1E959 279 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 SH2D7A6NKC9 451 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-213ENST00000565173 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-213ENST00000565173 MPIG6BO95866 241 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 CSN2P05814 226 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 BRS3P32247 399 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 ZP1P60852 638 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 RCN1Q15293 331 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 HLA-DRB5Q30154 266 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 FAM220AQ7Z4H9 259 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 SAXO1Q8IYX7 474 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 PELI1Q96FA3 418 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 PPIL3Q9H2H8 161 aaKnown RBP6.82□□□□□ -1.32
CAPN3-213ENST00000565173 LINC00574Q9H8X3 128 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 RHOFQ9HBH0 211 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 INPP5EQ9NRR6 644 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 EXOGQ9Y2C4 368 aaKnown RBP6.82□□□□□ -1.32
CAPN3-213ENST00000565173 KIAA2026Q5HYC2 2103 aa6.82□□□□□ -1.32
CAPN3-213ENST00000565173 KBTBD11-OT1A0A1B0GTJ5 212 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 DAPL1A0PJW8 107 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 FUOMA2VDF0 154 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 H0YHG0 523 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 J3QLW9 94 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 EI24O14681 340 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 DEGS1O15121 323 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ALPLP05186 524 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 PF4V1P10720 104 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF44P15621 663 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF19P17023 458 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF20P17024 532 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 PTGFRP43088 359 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 SNRPGP62308 76 aaKnown RBP6.81□□□□□ -1.32
CAPN3-213ENST00000565173 SLC35A2P78381 396 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 SCN1BQ07699 218 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ALKBH1Q13686 389 aaKnown RBP6.81□□□□□ -1.32
CAPN3-213ENST00000565173 KISS1Q15726 138 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 KRBOX4Q5JUW0 171 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 THNSL2Q86YJ6 484 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 CBR4Q8N4T8 237 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ACBD7Q8N6N7 88 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 CHST4Q8NCG5 386 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 OR4D6Q8NGJ1 314 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 OR51T1Q8NGJ9 327 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 OR5D18Q8NGL1 313 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 OR13C3Q8NGS6 347 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 OR13C9Q8NGT0 318 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 CREB3L1Q96BA8 519 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 RNFT2Q96EX2 444 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 KIRREL1Q96J84 757 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 HRASLS5Q96KN8 279 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF649Q9BS31 505 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 AASSQ9UDR5 926 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 MYRFQ9Y2G1 1151 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 ORC6Q9Y5N6 252 aa6.81□□□□□ -1.32
CAPN3-213ENST00000565173 TRAV24A0A0B4J272 114 aa6.8□□□□□ -1.32
CAPN3-213ENST00000565173 ZNF729A6NN14 1252 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms