RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ZP1P60852 638 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 PPP3R1P63098 170 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 GDPGP1Q6ZNW5 385 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 Q8IYB0 196 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 SAXO1Q8IYX7 474 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 OR8H2Q8N162 312 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 ZSCAN4Q8NAM6 433 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 OR4S1Q8NGB4 309 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 THRSPQ92748 146 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 UFD1Q92890 307 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 ORAI1Q96D31 301 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 CPNE2Q96FN4 548 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 SNX22Q96L94 193 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 DERL3Q96Q80 235 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 MGLLQ99685 303 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 NKX3-1Q99801 234 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 SSX3Q99909 188 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 PPA2Q9H2U2 334 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 TMEM138Q9NPI0 162 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 ACOT13Q9NPJ3 140 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 VPREB3Q9UKI3 123 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 TRAV8-7A0A075B6U6 113 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 CLPSL1A2RUU4 121 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 PIN1P1O15428 100 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 MAGEB3O15480 346 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 PSPNO60542 156 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 SC5DO75845 299 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 KDM4BO94953 1096 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 NDUFA7O95182 113 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 TMEM225BP0DP42 221 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 CPEP16870 476 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 TGFBR2P37173 567 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 EMX1Q04741 257 aaPredicted RBP11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 DYNC1I2Q13409 638 aaKnown RBP11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 Q6ZSV7 163 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 ZNF367Q7RTV3 350 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 LHFPL4Q7Z7J7 247 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 C11orf42Q8N5U0 333 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 TMED9Q9BVK6 235 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 SEBOXQ9HB31 216 aaPredicted RBP11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 RHOFQ9HBH0 211 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 EXOSC4Q9NPD3 245 aaKnown RBP11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 CKLFQ9UBR5 152 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 GLS2Q9UI32 602 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 FOXJ3Q9UPW0 622 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 LRRC42Q9Y546 428 aa11.09□□□□□ -0.63
VPS9D1-204ENST00000565023 A0A1B0GUS0 222 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 A0A1W2PPK0 400 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 GABRPO00591 440 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 ARG1P05089 322 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF728P0DKX0 622 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF44P15621 663 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 MAPK3P27361 379 aaPredicted RBP11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 BDKRB2P30411 391 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 DLX6P56179 175 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 INSL4Q14641 139 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 LRRC75BQ2VPJ9 315 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 MIDNQ504T8 468 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 TCF23Q7RTU1 214 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 SPARTQ8N0X7 666 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 PXT1Q8NFP0 134 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 LINC01006Q8NI28 216 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 GPER1Q99527 375 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 HMG20AQ9NP66 347 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
VPS9D1-204ENST00000565023 hADV38S2A0JD32 116 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 C17orf98A8MV24 154 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 HSPB6O14558 160 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 SH2D1BO14796 132 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 OR2H2O95918 312 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 OR3A1P47881 315 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 GP2P55259 537 aaKnown RBP11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF146Q15072 292 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 KCTD21Q4G0X4 260 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 DDI2Q5TDH0 399 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 ASCL4Q6XD76 172 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 OR13D1Q8NGV5 346 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 OR5R1Q8NH85 324 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 FAM192AQ9GZU8 254 aa11.07□□□□□ -0.64
VPS9D1-204ENST00000565023 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 IGHV1-8P0DP01 117 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF93P35789 620 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms