RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SMIM4Q8WVI0 70 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 RDH5Q92781 318 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 YIPF5Q969M3 257 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-205ENST00000564899 IFT22Q9H7X7 185 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.29□□□□□ -0.92
SF3B3-205ENST00000564899 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
SF3B3-205ENST00000564899 HSF4Q9ULV5 492 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 TRAV24A0A0B4J272 114 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 RFPL4AA6NLU0 287 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 OR2AT4A6NND4 320 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SERPINE3A8MV23 424 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 RFPL4AL1F8VTS6 287 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 LYNX1G3V0Z9 82 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 GABARAPH6UMI1 98 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 LGALS8O00214 317 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 HSPB6O14558 160 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SH2D1BO14796 132 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 GSTZ1O43708 216 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF205O95201 554 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 OR2H2O95918 312 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 MELTFP08582 738 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 LYNX1P0DP58 116 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 PSG2P11465 335 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 DAOP14920 347 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 MUC1P15941 1255 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 CEBPDP49716 269 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 GNG2P59768 71 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 MRPS11P82912 194 aaKnown RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 DGCR2P98153 550 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ARFRP1Q13795 201 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 MICBQ29980 383 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 Q5PR19 223 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 HACD4Q5VWC8 232 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 TEX36Q5VZQ5 186 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 TRIQKQ629K1 86 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SFRP4Q6FHJ7 346 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SUMF2Q8NBJ7 301 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 DEFB108BQ8NET1 73 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 OR5T2Q8NGG2 359 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 OR52I2Q8NH67 350 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 NEK7Q8TDX7 302 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 NUDCD2Q8WVJ2 157 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ST8SIA4Q92187 359 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 CYYR1Q96J86 154 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 FAAP24Q9BTP7 215 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 CXorf56Q9H5V9 222 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SCPEP1Q9HB40 452 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ABCB10Q9NRK6 738 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ELF5Q9UKW6 265 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 KCNK7Q9Y2U2 307 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-205ENST00000564899 SVEP1Q4LDE5 3571 aa9.28□□□□□ -0.92
SF3B3-205ENST00000564899 ARFGEF3Q5TH69 2177 aa9.27□□□□□ -0.92
SF3B3-205ENST00000564899 IGKV1D-17A0A075B6S4 117 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 TRAV38-1A0A0B4J264 116 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 MEIOCA2RUB1 952 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 MCRIP1C9JLW8 97 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PPIAL4DF5H284 164 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 OVOL3O00110 214 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 SULT1C2O00338 296 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 SLC33A1O00400 549 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-205ENST00000564899 RP2O75695 350 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 UPK1BO75841 260 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 LY6HO94772 140 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 TFF1P04155 84 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 LPLP06858 475 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 CD3GP09693 182 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 CSF3P09919 207 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 IL7P13232 177 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 COL8A2P25067 703 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PRDX2P32119 198 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 GABRA2P47869 451 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 INPP1P49441 399 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 EFNA4P52798 201 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 MRPS15P82914 257 aaKnown RBP9.27□□□□□ -0.93
SF3B3-205ENST00000564899 BAK1Q16611 211 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PAN3Q58A45 887 aaKnown RBP9.27□□□□□ -0.93
SF3B3-205ENST00000564899 OLFML2AQ68BL7 652 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 STUMQ69YW2 141 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 CD177Q8N6Q3 437 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 FCAMRQ8WWV6 532 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 Q96MF0 132 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 THAP7Q9BT49 309 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-205ENST00000564899 DPCDQ9BVM2 203 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 AK3Q9UIJ7 227 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 PPIAL4AQ9Y536 164 aa9.27□□□□□ -0.93
SF3B3-205ENST00000564899 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 MEIS3P1A6NDR6 274 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms