RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 A0A0G2JK05 382 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 DEGS1O15121 323 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 MAGEB3O15480 346 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 PEX14O75381 377 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 HTR1DP28221 377 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 ZP1P60852 638 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 ABHD12Q8N2K0 398 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 DTX3Q8N9I9 347 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 ZNF649Q9BS31 505 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 SMPD3Q9NY59 655 aaPredicted RBP14.24□□□□□ -0.13
NME3-205ENST00000563854 TAS2R4Q9NYW5 299 aa14.24□□□□□ -0.13
NME3-205ENST00000563854 ODAMA1E959 279 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 SLC33A1O00400 549 aaPredicted RBP14.23□□□□□ -0.13
NME3-205ENST00000563854 RPSAP08865 295 aaKnown RBP14.23□□□□□ -0.13
NME3-205ENST00000563854 RAB3AP20336 220 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 GDNFP39905 211 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 PTGFRP43088 359 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 LRRC36Q1X8D7 754 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 NSUN5P1Q3KNT7 163 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 OR52W1Q6IF63 320 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 Q6P435 159 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 PARP16Q8N5Y8 322 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 CHST4Q8NCG5 386 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 OR51A2Q8NGJ7 313 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 OR4P4Q8NGL7 312 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 OR10K1Q8NGX5 313 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 CNIH3Q8TBE1 160 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 TNFAIP8L1Q8WVP5 186 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 CPNE2Q96FN4 548 aaPredicted RBP14.23□□□□□ -0.13
NME3-205ENST00000563854 COQ2Q96H96 371 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 CDCA4Q9BXL8 241 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 PRSS22Q9GZN4 317 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 PPIL3Q9H2H8 161 aaKnown RBP14.23□□□□□ -0.13
NME3-205ENST00000563854 RHOFQ9HBH0 211 aa14.23□□□□□ -0.13
NME3-205ENST00000563854 H0YJX3 145 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 GABRPO00591 440 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 FBXO24O75426 580 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 CLIC3O95833 236 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 LIMS3P0CW19 117 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 LIMS4P0CW20 117 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 CD24P25063 80 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 LMO1P25800 156 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 GLP1RP43220 463 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 MTNR1BP49286 362 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 ETV1P50549 477 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 RBM39Q14498 530 aaKnown RBP14.22□□□□□ -0.13
NME3-205ENST00000563854 OR2G6Q5TZ20 316 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 XAF1Q6GPH4 301 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 HEPN1Q6WQI6 88 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 OR4D6Q8NGJ1 314 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 ZNF596Q8TC21 504 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 CYGBQ8WWM9 190 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 RGP1Q92546 391 aaPredicted RBP14.22□□□□□ -0.13
NME3-205ENST00000563854 ZNF286AQ9HBT8 521 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 SERTAD4Q9NUC0 356 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 MRPS18AQ9NVS2 196 aaKnown RBP14.22□□□□□ -0.13
NME3-205ENST00000563854 TAS2R3Q9NYW6 316 aa14.22□□□□□ -0.13
NME3-205ENST00000563854 TOR1AO14656 332 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 WBP4O75554 376 aaKnown RBP14.21□□□□□ -0.13
NME3-205ENST00000563854 CD28P10747 220 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 NFYBP25208 207 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 DYNLT3P51808 116 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 CDK5R1Q15078 307 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 RSU1Q15404 277 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 TMEM95Q3KNT9 176 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 PAN3Q58A45 887 aaKnown RBP14.21□□□□□ -0.13
NME3-205ENST00000563854 TMPRSS11AQ6ZMR5 421 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 HAVCR2Q8TDQ0 301 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 GPR148Q8TDV2 347 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 CFHR4Q92496 578 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 JAM3Q9BX67 310 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 FGF20Q9NP95 211 aaPredicted RBP14.21□□□□□ -0.13
NME3-205ENST00000563854 DPM3Q9P2X0 92 aa14.21□□□□□ -0.13
NME3-205ENST00000563854 ALX3O95076 343 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 HTR3BO95264 441 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 CSN2P05814 226 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 CD2P06729 351 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 VDAC2P45880 294 aaPredicted RBP14.2□□□□□ -0.14
NME3-205ENST00000563854 OR3A4PP47883 348 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 BLCAPP62952 87 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 PIGYQ3MUY2 71 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 RPL22L1Q6P5R6 122 aaKnown RBP14.2□□□□□ -0.14
NME3-205ENST00000563854 Q6ZS46 218 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 RTN4RL2Q86UN3 420 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 Q8N2B8 174 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 CAPSLQ8WWF8 208 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 CORO2AQ92828 525 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 TMEM106AQ96A25 262 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 RDH12Q96NR8 316 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 OR6C3Q9NZP0 311 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 NOTCH1P46531 2555 aa14.2□□□□□ -0.14
NME3-205ENST00000563854 MEIKINA0A087WXM9 373 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 ZNF729A6NN14 1252 aaPredicted RBP14.19□□□□□ -0.14
NME3-205ENST00000563854 H3BUI4 141 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 MYL12AP19105 171 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 ARHGDIBP52566 201 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 PPP3R1P63098 170 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 BDH1Q02338 343 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 LTC4SQ16873 150 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 PXT1Q8NFP0 134 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms