RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.46■□□□□ 0.55
LINC01960-201ENST00000563759 M0QYG6 137 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 SLC33A1O00400 549 aaPredicted RBP18.46■□□□□ 0.55
LINC01960-201ENST00000563759 FCGR3AP08637 254 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 DTYMKP23919 212 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 CCR6P51684 374 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 RNASE10Q5GAN6 216 aaKnown RBP18.46■□□□□ 0.55
LINC01960-201ENST00000563759 SFRP4Q6FHJ7 346 aaPredicted RBP18.46■□□□□ 0.55
LINC01960-201ENST00000563759 HOGA1Q86XE5 327 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 FAM90A1Q86YD7 464 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 ETAA1Q9NY74 926 aa18.46■□□□□ 0.55
LINC01960-201ENST00000563759 RFPL4AA6NLU0 287 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 RFPL4AL1F8VTS6 287 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 CYB5R3P00387 301 aaPredicted RBP18.46■□□□□ 0.54
LINC01960-201ENST00000563759 LHBP01229 141 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 HRH1P35367 487 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 PPOXP50336 477 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 AGAP6Q5VW22 663 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 ZNF782Q6ZMW2 699 aaPredicted RBP18.46■□□□□ 0.54
LINC01960-201ENST00000563759 DUSP18Q8NEJ0 188 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 OR4K15Q8NH41 348 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 CACNG6Q9BXT2 260 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 CBLN4Q9NTU7 201 aa18.46■□□□□ 0.54
LINC01960-201ENST00000563759 CD74P04233 296 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 GLAP06280 429 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 NAT1P18440 290 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 TBPP20226 339 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 CD80P33681 288 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 MEF2DQ14814 521 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 OR5T2Q8NGG2 359 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 OR56B4Q8NH76 319 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 TINAGL1Q9GZM7 467 aaPredicted RBP18.45■□□□□ 0.54
LINC01960-201ENST00000563759 CHST6Q9GZX3 395 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 PPA2Q9H2U2 334 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 COPZ2Q9P299 210 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 WIPI2Q9Y4P8 454 aa18.45■□□□□ 0.54
LINC01960-201ENST00000563759 A0A1W2PPR1 153 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 OR2AT4A6NND4 320 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 AMY2AP04746 511 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 CSN2P05814 226 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 PLA1AQ53H76 456 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 ACTBL2Q562R1 376 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 EDARQ9UNE0 448 aa18.44■□□□□ 0.54
LINC01960-201ENST00000563759 IGHV3OR15-7A0A075B7D8 119 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 MDH2P40926 338 aaKnown RBP18.43■□□□□ 0.54
LINC01960-201ENST00000563759 TAS2R46P59540 309 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 FAM201AQ5SY85 155 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 TGIF2LYQ8IUE0 185 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 OR5H2Q8NGV7 314 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 UBTD1Q9HAC8 227 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 NUDT15Q9NV35 164 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 FBXO9Q9UK97 447 aaPredicted RBP18.43■□□□□ 0.54
LINC01960-201ENST00000563759 IFNL4K9M1U5 179 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 PMP2P02689 132 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 PSG2P11465 335 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 SRSF1Q07955 248 aaKnown RBP eCLIP18.43■□□□□ 0.54
LINC01960-201ENST00000563759 ATXN7L3Q14CW9 347 aaPredicted RBP18.43■□□□□ 0.54
LINC01960-201ENST00000563759 MICBQ29980 383 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 CHRFAM7AQ494W8 412 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 RSBN1Q5VWQ0 802 aaPredicted RBP18.43■□□□□ 0.54
LINC01960-201ENST00000563759 C1orf87Q8N0U7 546 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 OR51S1Q8NGJ8 323 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 UPRTQ96BW1 309 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 KIAA2026Q5HYC2 2103 aa18.43■□□□□ 0.54
LINC01960-201ENST00000563759 TFF1P04155 84 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 TCRBP04435 133 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 ARPC4P59998 168 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 COL10A1Q03692 680 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 ASCC1Q8N9N2 400 aaKnown RBP18.42■□□□□ 0.54
LINC01960-201ENST00000563759 CCL17Q92583 94 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 ZNF286AQ9HBT8 521 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 DCAF16Q9NXF7 216 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 ING3Q9NXR8 418 aa18.42■□□□□ 0.54
LINC01960-201ENST00000563759 IGKV1D-17A0A075B6S4 117 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 DISC1C4P0D8 188 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 PSPNO60542 156 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 ZNF205O95201 554 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 GOSR1O95249 250 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 NAPSAO96009 420 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 HPXP02790 462 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 IFNA6P05013 189 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 SOD3P08294 240 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 LMO1P25800 156 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 PRDX2P32119 198 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 GABRA2P47869 451 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 OR3A3P47888 321 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 CREB3L1Q96BA8 519 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 RIMS4Q9H426 269 aaPredicted RBP18.41■□□□□ 0.54
LINC01960-201ENST00000563759 TMEM165Q9HC07 324 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 IGHV1-69-2A0A0G2JMI3 117 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 DANCRP0C864 163 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 SCGB2B2Q4G0G5 96 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 SHEQ5VZ18 495 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 C11orf71Q6IPW1 123 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 CD177Q8N6Q3 437 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 OR5AP2Q8NGF4 316 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 TMEM106BQ9NUM4 274 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 ANXA10Q9UJ72 324 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 SCP2D1Q9UJQ7 156 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 LAMP3Q9UQV4 416 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms