RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GNRHRP30968 328 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 MAS1LP35410 378 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 EXTL1Q92935 676 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 UNKLQ9H9P5 680 aaKnown RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 Q9N2K0 584 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 LRRC3CA6NJW4 275 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 M0R036 132 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 ZNF205O95201 554 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 TK1P04183 234 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 S100A6P06703 90 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 FGF12P61328 243 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 CLINT1Q14677 625 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 EIF2S3LQ2VIR3 472 aaKnown RBP11.27□□□□□ -0.61
USB1-207ENST00000563149 AKIRIN2Q53H80 203 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 MEX3BQ6ZN04 569 aaKnown RBP11.27□□□□□ -0.61
USB1-207ENST00000563149 Q6ZPA2 131 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 SLC25A26Q70HW3 274 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 SELENOHQ8IZQ5 122 aaKnown RBP11.27□□□□□ -0.61
USB1-207ENST00000563149 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 HLA-CQ95604 372 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 IL22RA2Q969J5 263 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 FSCN3Q9NQT6 498 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 LYRM2Q9NU23 88 aaPredicted RBP11.27□□□□□ -0.61
USB1-207ENST00000563149 CABIN1Q9Y6J0 2220 aa11.27□□□□□ -0.61
USB1-207ENST00000563149 IGKV3D-15A0A087WSY6 115 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 NAPSAO96009 420 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 BAXQ07812 192 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 DAZAP2Q15038 168 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 IGSF11Q5DX21 431 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 TMEM182Q6ZP80 229 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 TBC1D26Q86UD7 250 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 FAM213BQ8TBF2 198 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 GTF3AQ92664 365 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 P4HTMQ9NXG6 502 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 A0A0G2JMM0 328 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 A0A1W2PPB8 328 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 FAM24AA6NFZ4 105 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 KIR3DP1A8MWS1 328 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 ZNF732B4DXR9 585 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 B4E171 279 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 ZNF587BE7ETH6 402 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
USB1-207ENST00000563149 TUSC2O75896 110 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 UCP1P25874 307 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 TSPAN7P41732 249 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 NPBWR2P48146 333 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 GFRA1P56159 465 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 PRSS12P56730 875 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 VAMP2P63027 116 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 LINC00596Q86U02 117 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 MKXQ8IYA7 352 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 GNPNAT1Q96EK6 184 aaPredicted RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 IP6K3Q96PC2 410 aa11.26□□□□□ -0.61
USB1-207ENST00000563149 METTL1Q9UBP6 276 aaKnown RBP11.26□□□□□ -0.61
USB1-207ENST00000563149 CACNA1EQ15878 2313 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 MRPL33O75394 65 aaKnown RBP11.25□□□□□ -0.61
USB1-207ENST00000563149 TRAPPC6AO75865 159 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 S100A9P06702 114 aaKnown RBP11.25□□□□□ -0.61
USB1-207ENST00000563149 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 GLI4P10075 376 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 CEACAM1P13688 526 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 RAB5AP20339 215 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 VDAC1P21796 283 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 FHITP49789 147 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 SULT1A1P50225 295 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 ID3Q02535 119 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 SSPNQ14714 243 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 PDCD1Q15116 288 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 CEACAM21Q3KPI0 293 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
USB1-207ENST00000563149 TMEM252Q8N6L7 170 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms