RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 FAM131CQ96AQ9 280 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 CLCF1Q9UBD9 225 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 AHDC1Q5TGY3 1603 aaPredicted RBP8.17□□□□□ -1.1
CDH1-205ENST00000562836 ATG2AQ2TAZ0 1938 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 TRBV24-1A0A075B6N3 115 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 TRAV38-1A0A0B4J264 116 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 A0A1B0GV50 99 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 FTCDNL1E5RQL4 147 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 KLK10O43240 276 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 GSTZ1O43708 216 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 ETHE1O95571 254 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CPMP14384 443 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ZFP36L2P47974 494 aaKnown RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 CDK3Q00526 305 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 HSPB9Q9BQS6 159 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CHST6Q9GZX3 395 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 PARLQ9H300 379 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CLEC1BQ9P126 229 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 FAM166BA8MTA8 275 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 SYNGR3O43761 229 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 AKAIN1P0CW23 69 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 PSG2P11465 335 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 UNGP13051 313 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 SRP14P37108 136 aaKnown RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DS4P43632 304 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 WNT3AP56704 352 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 RHOBP62745 196 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ACSM2AQ08AH3 577 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 PTPRNQ16849 979 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 LRRC75BQ2VPJ9 315 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 FAM162BQ5T6X4 162 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ACSM2BQ68CK6 577 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CD200R1LQ6Q8B3 271 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 BCDIN3DQ7Z5W3 292 aaKnown RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 CA13Q8N1Q1 262 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 IL22RA1Q8N6P7 574 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 KLHDC1Q8N7A1 406 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 TMEM170AQ8WVE7 144 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 MMABQ96EY8 250 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 KLHDC7BQ96G42 594 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 RLIMQ9NVW2 624 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 HS3ST2Q9Y278 367 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 TRAV8-7A0A075B6U6 113 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 MUC21A0A0G2JKD1 596 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 MUC21A0A140T8X8 626 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ZNF785A8K8V0 405 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ZBTB42B2RXF5 422 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CLDN34H7C241 214 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 F2RL2O00254 374 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 REM1O75628 298 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 LINC00032P0C843 101 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 CMPK1P30085 196 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 GNG4P50150 75 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 ZNF92Q03936 586 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 MUC21Q5SSG8 566 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 TMEM215Q68D42 235 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 PWWP2BQ6NUJ5 590 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.16□□□□□ -1.1
CDH1-205ENST00000562836 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 OR10V1Q8NGI7 309 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 NUDT8Q8WV74 236 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 IKZF5Q9H5V7 419 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
CDH1-205ENST00000562836 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 CRYGBP07316 175 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 THBS3P49746 956 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 TAS2R50P59544 299 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 FOXF1Q12946 379 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 PDCD1Q15116 288 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 CPSF6Q16630 551 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDH1-205ENST00000562836 OR4F17Q8NGA8 305 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 ZNF417Q8TAU3 575 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 FCAMRQ8WWV6 532 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 EID2BQ96D98 161 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 MS4A6EQ96DS6 147 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 TVP23CQ96ET8 276 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 OXGR1Q96P68 337 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 OR4F4Q96R69 305 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 GPER1Q99527 375 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 RARRES2Q99969 163 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 ORAI3Q9BRQ5 295 aa8.15□□□□□ -1.1
CDH1-205ENST00000562836 MRPL17Q9NRX2 175 aaKnown RBP8.15□□□□□ -1.1
CDH1-205ENST00000562836 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.1
CDH1-205ENST00000562836 J3QR06 171 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 MPZL2O60487 215 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 CLEC3AO75596 197 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 SLC25A6P12236 298 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.11
CDH1-205ENST00000562836 LSSP48449 732 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 ZNF121P58317 390 aaPredicted RBP8.15□□□□□ -1.11
CDH1-205ENST00000562836 SLC18B1Q6NT16 456 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 LCN15Q6UWW0 184 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 TMPRSS11BQ86T26 416 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms