RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CHRFAM7AQ494W8 412 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 RNASE10Q5GAN6 216 aaKnown RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 CCBE1Q6UXH8 406 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 Q6ZNX1 250 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 TMEM17Q86X19 198 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 GCSAMQ8N6F7 178 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 GVQW1Q8N7I0 195 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 OR5H2Q8NGV7 314 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 OR4K15Q8NH41 348 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 NEU4Q8WWR8 484 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 DLL4Q9NR61 685 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 ZNF701Q9NV72 531 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 ETAA1Q9NY74 926 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 IL36RNQ9UBH0 155 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 SCP2D1Q9UJQ7 156 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 TRAV24A0A0B4J272 114 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 IGHV1-69-2A0A0G2JMI3 117 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 SLC33A1O00400 549 aaPredicted RBP8.66□□□□□ -1.02
USP3-219ENST00000561326 MT-ND4P03905 459 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 CD74P04233 296 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 AMY2AP04746 511 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 DANCRP0C864 163 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 PSG2P11465 335 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 COX6B1P14854 86 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 GIFP27352 417 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 SLC6A1P30531 599 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 RFX2P48378 723 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 ARPC4P59998 168 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 TSPAN5P62079 268 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 KCNJ8Q15842 424 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 SPRNQ5BIV9 151 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 SHEQ5VZ18 495 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
USP3-219ENST00000561326 SFRP4Q6FHJ7 346 aaPredicted RBP8.66□□□□□ -1.02
USP3-219ENST00000561326 PEG10Q86TG7 708 aaKnown RBP8.66□□□□□ -1.02
USP3-219ENST00000561326 DTX2Q86UW9 622 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 BPIFB2Q8N4F0 458 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 OR4S1Q8NGB4 309 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 OR5T2Q8NGG2 359 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 OR5D13Q8NGL4 314 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 OR4C16Q8NGL9 310 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 CCL17Q92583 94 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 PRRT1Q99946 306 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 UBTD1Q9HAC8 227 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 ZNF286AQ9HBT8 521 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 TMEM165Q9HC07 324 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 TMEM106BQ9NUM4 274 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 ZNF581Q9P0T4 197 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
USP3-219ENST00000561326 PPIAL4EA0A075B759 164 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 FUOMA2VDF0 154 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 OOEPA6NGQ2 149 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 PPIAL4DF5H284 164 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 PYCARD-AS1I3L0S3 204 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 LGALS8O00214 317 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 HSPB6O14558 160 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 NDUFA2O43678 99 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 NAPSAO96009 420 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 CYB5R3P00387 301 aaPredicted RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 CD8AP01732 235 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 TCRBP04435 133 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 FCER2P06734 321 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 FCGR3AP08637 254 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 HRH1P35367 487 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 MRPS11P82912 194 aaKnown RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 COL10A1Q03692 680 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 TLE4Q04727 773 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 GRK1Q15835 563 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 OR52W1Q6IF63 320 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 RTN4RL2Q86UN3 420 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 ZNF561Q8N587 486 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 ASCC1Q8N9N2 400 aaKnown RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 MED30Q96HR3 178 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 SNX22Q96L94 193 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 TRAF4Q9BUZ4 470 aaPredicted RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 DNTTIP1Q9H147 329 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 PPA2Q9H2U2 334 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 MYOZ1Q9NP98 299 aaPredicted RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 ZNF230Q9UIE0 474 aaPredicted RBP8.65□□□□□ -1.02
USP3-219ENST00000561326 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 PPIAL4AQ9Y536 164 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 NUBP2Q9Y5Y2 271 aa8.65□□□□□ -1.02
USP3-219ENST00000561326 RELNP78509 3460 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 HRNRQ86YZ3 2850 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 IGHV3OR15-7A0A075B7D8 119 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 TRBV6-6A0A0A6YYG2 114 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 KIR2DS1A0A191URI9 304 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 TMEM30CPA0ZSE6 113 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms