RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 DEGS1O15121 323 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 UCHL1P09936 223 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 CD37P11049 281 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 ZNF44P15621 663 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 SERPINA2P20848 420 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 GDNFP39905 211 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 SLC9A3R2Q15599 337 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 SLC22A6Q4U2R8 563 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 LDLRAD2Q5SZI1 272 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 BRICD5Q6PL45 260 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 GLIPR1L1Q6UWM5 242 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 ZNF782Q6ZMW2 699 aaPredicted RBP11.34□□□□□ -0.59
TPM1-230ENST00000561266 GDPD3Q7L5L3 318 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 CMTM4Q8IZR5 234 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 OR5D13Q8NGL4 314 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 METTL9Q9H1A3 318 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 KCNK15Q9H427 330 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 METTL8Q9H825 291 aaKnown RBP11.34□□□□□ -0.59
TPM1-230ENST00000561266 IL36GQ9NZH8 169 aa11.34□□□□□ -0.59
TPM1-230ENST00000561266 MRPS28Q9Y2Q9 187 aaKnown RBP11.34□□□□□ -0.59
TPM1-230ENST00000561266 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
TPM1-230ENST00000561266 NPFFO15130 113 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
TPM1-230ENST00000561266 ZNF728P0DKX0 622 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 BMXP51813 675 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 P2RX3P56373 397 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
TPM1-230ENST00000561266 BAMBIQ13145 260 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 ATXN7L3Q14CW9 347 aaPredicted RBP11.33□□□□□ -0.6
TPM1-230ENST00000561266 FIP1L1Q6UN15 594 aaKnown RBP11.33□□□□□ -0.6
TPM1-230ENST00000561266 Q6YL49 198 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 ZNF367Q7RTV3 350 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 TMEM104Q8NE00 496 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 BANF2Q9H503 90 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
TPM1-230ENST00000561266 TRAV39A0A0B4J263 110 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 MELTFP08582 738 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 SRMP19623 302 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 COX7A1P24310 79 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
TPM1-230ENST00000561266 SAA4P35542 130 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 UBE2E1P51965 193 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
TPM1-230ENST00000561266 IL13RA2Q14627 380 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 Q9H521 79 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 BLOC1S6Q9UL45 172 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 LRRC42Q9Y546 428 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
TPM1-230ENST00000561266 CGB3P0DN86 165 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 CGB7P0DN87 165 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 MAPK3P27361 379 aaPredicted RBP11.31□□□□□ -0.6
TPM1-230ENST00000561266 BPIFB3P59826 476 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 TAF9Q16594 264 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 C17orf58Q2M2W7 97 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 HSD17B12Q53GQ0 312 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 UBE2UQ5VVX9 321 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
TPM1-230ENST00000561266 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 OR10K2Q6IF99 312 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 DYNAPQ8N1N2 210 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 CHST4Q8NCG5 386 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 FAM216AQ8WUB2 273 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 SLC25A28Q96A46 364 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 CPNE2Q96FN4 548 aaPredicted RBP11.31□□□□□ -0.6
TPM1-230ENST00000561266 YTHDF1Q9BYJ9 559 aaKnown RBP11.31□□□□□ -0.6
TPM1-230ENST00000561266 TCF7L1Q9HCS4 588 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 KIF25Q9UIL4 384 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 AK6Q9Y3D8 172 aaKnown RBP11.31□□□□□ -0.6
TPM1-230ENST00000561266 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
TPM1-230ENST00000561266 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 ODAMA1E959 279 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 TRIM77I1YAP6 450 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 CSTBP04080 98 aaKnown RBP11.3□□□□□ -0.6
TPM1-230ENST00000561266 CSN2P05814 226 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 GABRA5P31644 462 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 QRFPP83859 136 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 BLMHQ13867 455 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 PAN3Q58A45 887 aaKnown RBP11.3□□□□□ -0.6
TPM1-230ENST00000561266 KRBOX4Q5JUW0 171 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 AWAT2Q6E213 333 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms