RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RAB12Q6IQ22 244 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 METAP1DQ6UB28 335 aaPredicted RBP4.56□□□□□ -1.68
ZEB1-220ENST00000560909 CMTM4Q8IZR5 234 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 CD177Q8N6Q3 437 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 ST8SIA4Q92187 359 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 NRGNQ92686 78 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 C1orf159Q96HA4 380 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 LURAP1Q96LR2 239 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF488Q96MN9 340 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 VRK1Q99986 396 aaPredicted RBP4.56□□□□□ -1.68
ZEB1-220ENST00000560909 URM1Q9BTM9 101 aaKnown RBP4.56□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM59Q9BXS4 323 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 SHARPINQ9H0F6 387 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 SPACA1Q9HBV2 294 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 TREM2Q9NZC2 230 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 NLKQ9UBE8 527 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 COMMD3Q9UBI1 195 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 RABL2AQ9UBK7 228 aaPredicted RBP4.56□□□□□ -1.68
ZEB1-220ENST00000560909 RABL2BQ9UNT1 228 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 ST3GAL6Q9Y274 331 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 KCNK7Q9Y2U2 307 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 WIPI2Q9Y4P8 454 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 PPIAL4AQ9Y536 164 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 ZANQ9Y493 2812 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 TEX15Q9BXT5 2789 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 ITPR3Q14573 2671 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
ZEB1-220ENST00000560909 PRRC2AP48634 2157 aaKnown RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 VPS13CQ709C8 3753 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CSPG4Q6UVK1 2322 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 A0A096LNT2 108 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 TRBV6-6A0A0A6YYG2 114 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 IGHV3-64DA0A0J9YX35 117 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 TMEM82A0PJX8 343 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 METTL21EPA6NDL7 271 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 RFPL4AA6NLU0 287 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 OR2AT4A6NND4 320 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CLDN25C9JDP6 229 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 F5H0A9 414 aaPredicted RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 RFPL4AL1F8VTS6 287 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 LYNX1G3V0Z9 82 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 K7N7A8 449 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SLC33A1O00400 549 aaPredicted RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 MFNGO00587 321 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SH2D1BO14796 132 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 GEMIN2O14893 280 aaKnown RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CTDSPLO15194 276 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SIGLEC5O15389 551 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SOCS1O15524 211 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 HPGDSO60760 199 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PDCD6O75340 191 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 FCN3O75636 299 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CRTAPO75718 401 aaPredicted RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 LY6HO94772 140 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 NXPH2O95156 264 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 HTR3BO95264 441 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 MPIG6BO95866 241 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 HAND1O96004 215 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CYB5R3P00387 301 aaPredicted RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PLATP00750 562 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 HLA-DQB1P01920 261 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CSTBP04080 98 aaKnown RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 EIF4EP06730 217 aaKnown RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 WNT2P09544 360 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 LYNX1P0DP58 116 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 IRF2P14316 349 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PRKACAP17612 351 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PI3P19957 117 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SERPINA2P20848 420 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 FUT3P21217 361 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 GLRA1P23415 457 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 DNASE1P24855 282 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PRDX2P32119 198 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 MDH2P40926 338 aaKnown RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 NR4A2P43354 598 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 KCNJ3P48549 501 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 ATP5J2P56134 94 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 BTG1P62324 171 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 HOXA4Q00056 320 aaPredicted RBP4.55□□□□□ -1.68
ZEB1-220ENST00000560909 LSAMPQ13449 338 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 ARL6IP1Q15041 203 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 KCNJ8Q15842 424 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 TAF9Q16594 264 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 MICBQ29980 383 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 CR1LQ2VPA4 569 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PIGYQ3MUY2 71 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 MOGAT2Q3SYC2 334 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF260Q3ZCT1 412 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 FAM201AQ5SY85 155 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF880Q6PDB4 577 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 ZNF841Q6ZN19 808 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 C17orf107Q6ZR85 190 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 DCDC5Q6ZRR9 648 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 Q6ZS49 121 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 REC114Q7Z4M0 266 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 Q8N1X5 172 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 SAMD12Q8N8I0 201 aa4.55□□□□□ -1.68
ZEB1-220ENST00000560909 OR56B1Q8NGI3 324 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms